Ll_transcript_475894

• Id Trinity: TRINITY_DN47485_c0_g5_i5
• Name Transcript: Ll_transcript_475894
• Sequence: GAATTGAGAAAAAGGACATAGGAAAATGAAGAAAGAAGAAGGTGCTCTTTTATTTATTTCTCTCTCTATCGATAATATCTCTCTTTCTATTTTTTGTCCC TAGATTTTCTCAGAATCCAAACACACTCTCTCTGCTTCACCTAAACCCCATTGAGATCTGAAAGTCAAGACTTTGTCTTCATATCTCTCTATTTCTCATT CTTTCTCACTCTTTTCTCACCTTTTATGTTTTACAGAATAATGCTGAATCTTGTGCAAATGGAACATGCCCTGTGAATTGGACCTGTTAAAGCAGCTAGT ACCATCTACTAATTTGATAAGCTCATCTTAACCTTAATAGCTGAAAGATGAATCATTTGACTATTGATACCGGAGATTCCTTCGCAAGCTTGCTTGAGCT TGCGGCCAATAACGACGTTCAAGGCTTCAAACGATTGATTGAGTGTGATCCTTCCTCAGTAGATGAGGTTGGGCTGTGGTATGGTCGTAGGAAGGGATCA AAACAGATGATCAATGAGCACAGAACTCCTTTGATGGTTGCTGCTACTTATGGGAGTATTAATATTATGAAAATGATTCTTTCACTATCTGATGCAGACA TTAACCGCTCTTGTGGACTTGATAAGAGCACTGCTCTTCATTGTGCAGCATCTGGTGGGGCTGAAGATGCTGTTGATGCTGTGAAACTGCTTCTGGCAGC AGGCGCTGATCCGAATTTGGTGGATGCCAATGGAAATTGTCCGGTGGATGTTATTGTTTTTCCTCCCAAGCTTGAGTGTGTCAAAAACAGTCTTGAACAA CTTCTTCAAACTGATGATTCTATTGCTGGCTGCAATCTTAGGGTGATTACGACCTCCTCATTCAATTCATATTCTCCACCATTATCAAATTCACCAGAGA ATGGATCTCCTTCTGCACCAGATTTCCAATTGAAGATGAAGCCAAAAGATGTGCCTGTTTCTTCTGCATCTGAGAAGAAAGAATATCCTATTGATCCTTC TCTTCCTGATATCAAGAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGGCCTTGTTCTCGTGCTTATTCTCATGATTGGACT GAATGCCCTTTTGTCCATCCAGGAGAGAATGCTCGTAGAAGGGACCCAAGAAAATACCATTACAGCTGTGTCCCGTGTCCTGATTTTCGCAAGGGTGCTT GCCGGCGTGGGGACATGTGTGAATATGCTCATGGTGTTTTTGAGTGCTGGTTGCATCCTGCACAATATCGAACCCGTCTCTGCAAGGATGGGATAAATTG CTCCAGAAGAGTGTGTTTCTTTGCGCACACCGCTGAAGAGCTTCGACCATTATATGTTTCAACTGGTTCTGCTGTCCTCTCGCCTCATGCGAGCACATCC TCTGCCATGGACTTTGCTGCTGCCTTGAGCATGTTGCCAGGCTCTCCATCCTCAATGTCCATCATGTCACCTTCGCCATTCACTCCACCTATGTCACCTT CCGCTAATGGCATGCACTCTAATGTTCCGTGGCCTCAGCCGAATGTCCCTGCCTTGCATCTTCCAGGAAGTAATCTTCAGTCCAGTCGTTTGAGATCTTC ACTCCATGCTAGAGATATTCCTATGGATGACTTCGACTTGTTCTCTGATTATGATCAGCAGCATCTCCTTAATGAGTTATCTTGTTTATCTCCACAGCAT CCTATGAATACTAATAATCTGAACCGCTCAGGTCGGATGAAACCCCTGACTCCTTCAAATCTCGATGACCTCTTCTCTGCTGAGAGTTCTTCTCCTCGAT TTGCTGATGGGTCACTGGCTTCAACTGTTTTCTCTCCAACTCACAAATCAGCTGTCTTTAATCAATTTCAGCAACAGCAAAGCATGTTGTCACCTGTGAA TACTAATTTTTCTCCTAAAAATGTTGAGCATCCTTTGTTGCAGGCTGCCTCTTTCGGGGCTCAGTCATCAGGAAGAATGTCCCCACGAAACATGGAACCT ATTTCTCCAATGAACTCCAGGATGTCTATGCTAGCACAGCGTGAGAAGCAGCAACAATTTCGCAGCCTTAGCTCCCGGGAACTAGGCTCCAACTCTGCTG CTGCTATCGCTGCCGCCTCAGCCAACTCTTGGTCTCGATGGGGATCCCCAAATGGTAGGGCAGACTGGGCAGCTGGCATAGAGGAATTCAATAAGCACCG AAGGTCATCTTCATTTGAGCTGGGGAACAACGGCGAGGAGCCAGATTTATCATGGGTGCAGTCACTCGTCAAAGAATCTCCAACCGAGATTAAAGAGAAG TTGACTACAAATGTTGAAGTAGCTGGATCCCCCGGTGAGGGGTCAAACACAAAATCACAAAAGGAGTCTGTTGATCACGCCGTATTGGGAGCCTGGCTCG AACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGACAACGAGTTTTGCTGATGAGGTAGTTAACAACAGAAAGGATTTCCGGTAAATACTATAT TTATGTTATTTTTTTGAAGTTTTGTTGTTGATGGAGGGCTACAGGACTAAGAAAAGAAGCAGTAAGAAAAAGAATCACTGGAGGTATATTCATTTTCATA TGTAGTGTTTACTTAAGTAACTTTAGCAGGGTCAGAAAACCAATGAAGGGAACTTTCAGACAATTGATCCCAGTGTAGGGTTTTTTGGCTGCCAATCTTT TCAAACTTTAGGTTTCATAGTCCTGTCATTTATTTTTTTCTTCCATAAGGAGCAAATGTTCTATAAAAATGTATTATTCCTATTCCCTATTCCTTATTCC CTATTCCTACCAAAGTTTGATCTTATCTTTCTCTTCTAATTTTTGCATTGGGGTAGAAAGACATTACAGAAGGGTCATTGGAATTAATTTCCTTGACTCC ATTTTGGTCTAGTTTTGGGAATCAATAATTGTGGATTGCAGGGAGTGGGGTAATTATGATTAGGACTATTTGAAAGGTTGATCCTTTGGTCATGTATAAC ATTCAATTCAAGATTATTCCTATATTATTCTAATACCTTCATTTCTATATTGTTATCATTATCTTATTTGCAATGTATATTGTTTCTGTCTTTGCACAAT GGATGAAATACCATTTTGTTATATCTTGA
• Tissue: pods
• Gene name: LI_gene_153040;
• Additional information: details;

Expression of Ll_transcript_475894

FPKM

• PAB: 6.2
• PNAB: 26.2
• PS1: 33.1
• PS2: 13.7
• PS3: 23.5
• PW1: 21.7
• PW2: 14
• PW3: 10.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475894

• Blastp: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 64.38% of identity
• Blastx: Zinc finger CCCH domain-containing protein 30 from Arabidopsis with 62.23% of identity
• Eggnog: nucleic acid binding transcription factor activity(ENOG410Y7IC)
• Kegg: Link to kegg annotations (AT2G41900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444092.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;