Ll_transcript_475901

• Id Trinity: TRINITY_DN47485_c0_g5_i8
• Name Transcript: Ll_transcript_475901
• Sequence: AGTTTTATTTAAATATGGACCATTTAATATTAGTCTTTGAAAATCACATGTTTTTTCCATGTTTGCTAAGAAATTTTAGATGAAAAAAAATATAGTTTTT GGCCTAAAATGTTGACTATGGAGGAAAATTAAATGAACTCCGTTAAGAAAAATATGATTTTTATTTCATCCTCATAGGAGTAAATGAATGACAGGTTTTG TTAATTTGTTTGAGTCTGTTACCATTTCTCGTTTATTCTGTTACCTGGATTCATGCTATTTTTTTTGTAATGTTGGTTCATAACTATAACAACTAATAGA GTGAACGTTTATCTATTAAACCAATGCTTGTTGCAATTTCATAACTAATGTTTGCTTGTTGCAATATTCTTGGTGATTCTTGATCCTGTAACTTTCCAAA TAATCAGTTTGCTCAACAGTAACCAGCATTCATAGATGAGGGGAATCTACACCTTAATTTTACTTTATTCTACTAGGGCCTCAATATATTTCCATTCGCA GTGGTACCAAGAGTTAACCTTCTGAAATTAGTTTGGTTATGGAGGAATATGGAGGACAAGAAGGGCTGTACCATAAAATTTCTGCCTTGCTTGAATTTTC GGCCGCTGATGATCTAATTAGTTTCAAAGATGCGGTCGAAAAAGAGGGTCATGATGTTGATGGGGTAGGGCTGTGGTATGGAAGGAGGATAGGCTCAAAT AAAGTGGGTTATGAAGAGAGGACTCCTCTTATGATTGCTTCTATGTTTGGAAGCCTAAGTGTATTAACCTATATTCTTGGAACAGGTCGTGTTGATGTTA AGCGGGCGAGTAGGTCAGACGGGGATACTGCTCTTCATTGTGCTGTTGCTGGGGGTTCTGCTGCTTCCCTTGAGATTGTCAAGCTTTTGCTTGATGCATC TGCAGATGTTAACACTGTTGATGCCAACGGTAACCGGCCCTGTGACTTGATTTTCTCGGTGGCTAATCCCATCTTCAATTCAAAGAAAAGAATGCTAAAA ACCTTGCTGGAAGGTACACACGGTACTTATCAGGCATCTCTCACATTTGAGGAAATGGTAGGCCAAATTGAGGAACAACAAAGGCAAGATATGAATAACA AGCCTCATGTTTCTAAAGATGGGGCCGAGAAGAAAGATTATCCAGTTGACCTCTCCCTTCCACACATAAAGAACGGAATATATAGTACCGATGAGTTTAG GATGTATACATTCAAAGTGAAGCCTTGTTCGAGGGCTTATTCTCATGATTGGACTGAGTGTCCTTTTGTTCATCCAGGTGAAAATGCAAGGCGACGAGAT CCTGTGAAATATCAATACAGTTGTGTCCCTTGCCCTGAATTCCGGAAGGGATTGTGCAGCAAAGGGGATGCTTGTGAGTATGCTCATGGTATTTTTGAGT GTTGGCTTCACCCTGCACAGTATCGAACACGGCTTTGCAAGGATGAGAGTGGATGCACCAGAAGAGTTTGCTTTTTTGCTCACAAGCTGGAGGAACTTCG CCCATTGTATGCATCTACTGGTTCTGCATTGCCTTCTCCTCAATCATATCCAGCTAGTGCATCTTCATTGGATATGGGTTCGGATAGCCGTTTATCACTA GGGTCTCCACTTGTATTAACACCACCTGCTTCGACACCACCTTTGAGTCCATCTAGAGCATCTTCTGTTGTGGGCGGAGCCATGTGGCAGTCCCCTACTC TTCAGCTTGCCGGAAGCAGATTGAAAACTGCATTAAATGCTAGAGATTTTGATTTAGACATTGAATTGTTTGGACATGAAAATCGTCAGCAAATGCTATT GTTAGATGAGATGGCTAGTTTTTCACCCCCTTCAAAATGGAAAAGTACTATGCCGAATAGTCCATCTTTCCCTATCTCTTTGGGTGATGATGTTGGGGAG TTAAATAGGCTTTCAGGAGTTAAGCATACTAACCTCGAAGACATTTTCGGGTCTCAGTTACAATCTCCAACTGGAATCCAGGCGCATCAGAATGTGAACA AACAATTGAGGGGCTATTCTTCAAGCTTCTCGACTTCAAATGCGATTGGATCACCTTCATTTAAAGTTGATCCATCTGGCTCAGCTGCCACATTGGCTAT GAATTCAAGAAATGTCGCATTTTCGAAGCAAAGCCAGAGCCTTATTGACCTATCTTCACCAATGGAGGCTTCAATCTTCTCTGGATGGGGCTCCCCTGAT GGCAAACTAGACTGGGGCATCCACGGAGAAGAGCTGAATAAGATGCGAAAATATGCTTCTTTCGGATTTCGAGCAACAAGTGGTCCTTTAACACTAGCTG CAACCACAGTGCCACTAAATGTTAATGAACCAGATGTATCTTGGGTTCATTCACTAGTGAAGGATGGTCCACCATTTGAATCTGCTCAGTATAGTGTTGA AGAGCAACGACAACAGCCGCAACACTATCTTAAAAACGAAACAGACGTGGTTCCGGCTTGGCTGGAACAAATGTACATGGAGCAGGAACAAGAGCAGATG GTAGCTTGAATACAAGCATGCAGTAATTACTCTAACATTGGATCTTGGATAAAACTCTAAACAACTTTACTAAAGTGGTGATTTTTTTAATATATATACA AATTCATTATTATTAGGTAACAATTTGTAGAGATTATGGTAAAATGCCCAAGGCAACCATACACCGAAGTTGGGCAGAATGCAAGTTTTCTGCTCTTACA ACTATCTGTTGGGAAATTGATTCCATTTTATCCATTAAGGTTTGTTTACGAGTTTGATTTTGGGGGGAATGAAGGGCGAATGAGGTATTTAGAGGCATCT CACAAGTGTATGATTCTCAAACATTCCCTTTCCATTTCTTTCCCTCC
• Tissue: pods
• Gene name: LI_gene_153040;
• Additional information: details;

Expression of Ll_transcript_475901

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.5
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475901

• Blastp: Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 49.26% of identity
• Blastx: Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 47.89% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410XR0Z)
• Kegg: Link to kegg annotations (AT5G58620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447011.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;