Ll_transcript_475893

• Id Trinity: TRINITY_DN47485_c0_g8_i1
• Name Transcript: Ll_transcript_475893
• Sequence: GGCAGCTAAGTGGGCTCGACTTTTTGACTCAAACCATAAAGAGAAGGGACTGAAAAGTCTTCTACTCCCTCCTCGTGTTTTTCCATCTCTCTTTCTCTCT CTCAAAAGCTTTGTCAGCATTGGAAAAAACAACGCTTTGGGCTTCTTCACAAACTTTGGTGTTGTTTATTTGTTTATAAATTATAAGGTTTCAAAGGGAA GATAGAGTCATGTTCACTGCTTCCAATGATTTGCATTACAGAATTTCTGTTTTGCTTGAGTTCTCAGCCGCAAATGATGTGAAGGGTTTCAAAAATGCAA TTGAAGAAGAGGGTCATGATGTTGATGAGGTGGGATTGTGGTATGGAAGGAGGGTTGGTTCAAAGGACTTTGGTTATGAAGAGAGGACCCCACTTATGGT TGCTGCTATGTTTGGAAGCAAGGATGTGTTATCTTATATTCTTGGAACTGGTGGTGTTGATGTTAACCGGGCTTGTGGGTCAGATGGGGCCGCTGCCCTT CATTGTGCTGTTTCTGGGGGTTCTGCCAATTCGCCGGAAATCATCAAGCTTTTGGTTGATGCATCGGCTGATGTTAATGCTGTTGATGCCAATGGGAACC GTCCCTCTGACTTGACTGACTTTGTGTTCCCTAGTATATTCAATCCTAGGAGGAGGATACTGGAAGCCATACTAGAAGGTAGAGATGGTGGTTTTGATGA GGCTTGCCTTACATTTGATAAAGCAGATGGCGAAATGGTGAGGATGCAACAGCATTATATCGATGCACATCGTGTTCCAAAGGAAGGGACTGAGAAGAAA GTTTATTCTGTTGATGTCTCTCTTCCAGACATAAAGGATGGGATATATAGTACTGATGAGTTTAGAATGTATACATTCAAAGTGAAGCCATGTTCAAGGG CTTATTCTCATGATTGGACTGAGTGTCCTTTTGTTCATCCAGGTGAAAATGCAAGGCGACGAGATCCTTTGAAATATAATTATAGCTGTGTCCCTTGCCC TGAGTTCAAGAAGGGATTGTGCAGCAAAGGAGATGCTTGTGATTATGCACATGGTATCTTTGAGTGCTGGCTTCACCCTGCGCAGTATCGAACTCGGCTT TGCAAAGATGAGGCTGGATGCACTAGAAGAGTTTGCTTCTTTGCTCACAAGCTGGAGGAGCTTCGCCCGTTGTATGCTTCTACTGGTTCTGCAATGCCTT CTCCCAAATCATATTCGGCTACTGCTTCTTCATTAGAGATTGGTTCATTAAGCCCTTTCACACCAAGCTCTCCACCCGCCTCAGTACCACCTTTGTCTCC ATCTGGATCAGCTTCTCCTCTGGGCAGAGCAGCCATGTGGCAGACCTCTCAGTTTCATGTAGCAGTCCCTACGCTTCACCTCGCTGGAAGCAGATTGAAA ACTGCATCAAATGCTAGAGATGTTGGTTTAGGCATTGAATTGCCTGGACCAGAAAATCGTCAACTTATGCAGAATATGCTTTATTCGGATGAGATGGCTG AGCTTTCATCCCCTTCCAAATGGAAAAATACCAAGCTAAATAGTCCATCTTTTCATGACTCATTTGATGGTGATGCTGGGGAGTTAAATAGGAATCAGCA ACTGAGAGGCTATTCTTCAAATGTGATTGGATCACCATTTTCTTTGAATTCAAGAAATGCTGCATTTTCAAAGCGGAGCCAGAGCTTTATGGAGCGAAGT GTGGTGAGCCATAATTCTGAGCCTTCCATCTTCTCTGGATGGGGCTCCCCTGATGGCAAATTAGACTGGGGCATCCGCGGAGAAGAGCTGAATAAACTGC GAAAATCTGCTTCTTTTGGATTTGGAGGAACCAGTAGTCCTTTATTAATGGCTGCAACCACATCACCATTGAATGTTGATGAACCAGATGTATCTTGGGT TCATTCACTTGTGAAGGATGCTCCACCAATGGAAACTGGCCAGTATAGCATCGAAGAGGAGCTACATTCACCGCAACGATATCTTAACAATGGAACAGAT GTGGTTCCAGCTTGGCTGGAGCAATTGTACATGGAGCAGGAACAGATGGTGGCTTGAATGCAGCATTTTCTCTGGCATTGGATATATTTCATGAAACTCT AAAAAAGTATATTTAAGTGATGATTTTTTTATAGAAACTCATTATATATAGGTAACAATTTGTAGAATTTATGGTAAAATACCTGCCAAGGCAAACCATA CTGAAGATGAACTGCACCTTTAACTATTTGTACTAGGGTAATTGATTCAATTTTTTTCCTTATCTTTTCTTTTATTGGTTATTTTCTATTGATCTGAGTT TCCATTAAAAAGAGTATTAGAAATGTAGTGCGGTTGGTAAAATGTTTGGCCACCCCTACCGTATGGAGATCTTCCGTCCCCAAATATGTCCCCAACCATG TACCAAGCCAATCAGAATAAAGAAAAAATAAATAAAAA
• Tissue: pods
• Gene name: LI_gene_153043;
• Additional information: details;

Expression of Ll_transcript_475893

FPKM

• PAB: 11
• PNAB: 2.3
• PS1: 4.5
• PS2: 1.8
• PS3: 4.1
• PW1: 4.1
• PW2: 3.4
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_475893

• Blastp: Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 48.78% of identity
• Blastx: Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 47.93% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410XR0Z)
• Kegg: Link to kegg annotations (AT5G58620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418018.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;