| Id Trinity | TRINITY_DN47493_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_475372 |
| Sequence | GGAATGTGAATGCGAGTAATTTCCAAGTCACCCTTGTGATTTCCCGCCACAAAGAGGGGCACCTTAAACCTCTCTCTCTCTCTCTTCATCGCATCGCATG GCTCCTCCTTCTCCCATCGTCACTGATACGCTGTCTCAATCATCATCACCTCGAACTGCAGACAATGATCTTCAGCCGTTCTTTGTGCTTCACAAAGCAT CTTCCCAAAGAAAAGATAAAGTATCAACAAGGCAGGGAAAAGTGCGAAAGAGAAATGAGTTATCTTTGTCATCATCGCAAAGCACAAAGAAACTGGAAGG AAGTATGATTGAAGAATGTGATCATCATTTATTTCAGCAACTAAAGATTGAAGCTTTTGGCAATGTTTGGACAAAAACTGAATCCACCATTAAGGACGTT TTGAGAGATCTTGATGCTAGTGTATTTAATGATATACAACAATGGGTTTTGGAGTGCTTCAACGCTACTGCATTGATTGGAGAACTTAGTGTTGCTGAAG CAACTCGGTCTTTTCCTGCTCTAAACAATACCAATCTCGGGAAACTGTTCACTGCATTGGTTATAACCAGAAACATAGAGTTTGTTGATGACATATTGAC ATTTGGAGAGCTTGGACATTTCTTGAAATCCCAAGGATGTCATGTGGCTGTGCTTTCATCAATAGAATTCTCAGTCAAAAATGGGATTGCTGGTTGCTTA AAAGCTTTATTGCGAGAGTTTATAGCTGGTGCTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGACCGCTACAATAAACCAC TAGTGCTGATCATTAATGATTTGGAAAGATGTTGTGGATCAGTCTTAACTGATTTCATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATGTT GATAATTGGAGTTACAACCACAGTGGATAACACCAGAAACATTCTGCCATCACAAGCTCTTGAGTCTTTGTGTCTGTCTAAGTTTTTGCTTGGAACACCA GCTGAGAAAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAGCAGTGCACTACATTTAATATTGGCCATAAGGTGGCACTCTTTCTGCGAAACTTCTTCA TCAACCAGGATGGGACATTAACATCTTTCATAAGAGCTTTGAAGGTAGCATGCTTATTACATTTCTCTATGGAACCTCTGAGTGTCATCCATGGGAGACT CGCTGAAGACCAAATGGGGAAGTCTGCATTATCACCTGAGACTATGCTGAAATACATGGATGAACTTCCAACTGATGGAAGGAATCAAATGGTTGATCAG ACTTGAAAGAGCATGGCTCAGAGTTTGTCAGAATTGCTGACAGTGCGGAAGTTATGGAGCACTGCTGTCCTTATTCATGAGAAATTGAAAACATTTCAAT CTTCAGCAATATGTGAAGATGAAAAGAGTTTACGTAAGAGTTCCAAGGACATTTCCAAGAGAAATGCGTCCAGGGTTTCACCATACGTAGACAAGGACTC AAGAATGTTAATCTCACAAGCTGTCTCATTTATAGAGTTGTTAGTTAGAAATTATATGAAGCCCATTGAATGCATGCCTTTCCATGAAATTTTCTGCTTC AAGGATGTTGAGAAGCTTCAATCGGTTTTGATTGGAGATCCAAGAAGTAGGATTCAAGTTGATTTGTTGGAGTCCTATAAGATCTTAAGGTGCAGCTGCT GTAACAAGAGTGGCAATGCCATATTGCCATCCAAGCATGATTCCTCAATTATGTATTCCCTGGCTCAAGAGCATGGCGATCTTATAAATCTTCATGACTG GTTCCAGTCTTTTAGAACAATCATTGTTCAACCTACAACTAAAAGGAAACAAAAGACAAAGCAACCCTCTCATGGGTCTGGAGACCAAAATGAAGCTTCA ATTCAAGCACGCTTTTGTAGGGCAGTTACGGAGTTGCAGATAACAGGGCTAGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGTTCAAAGGATAGCAT TCGGACTTTGATTCCAGGAAAGAATAGTTTAATGCCCATTTTGTCATTTTCAAAATTTCTTATTGGAATGTAATCTAATTTTATTTTCTTAAGATATCTA TTCATGGTTTTGATAAGTTACTTGGTAACTTTGATGCACCTAATTTAAAACCAGAAAAATAAAAAAACATTAAATTTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_153096; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475372
| Blastp | Origin of replication complex subunit 3 from Arabidopsis with 47.16% of identity |
|---|---|
| Blastx | Origin of replication complex subunit 3 from Arabidopsis with 46.03% of identity |
| Eggnog | origin recognition complex subunit(ENOG410XT1W) |
| Kegg | Link to kegg annotations (AT5G16690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413103.1) |
| Pfam | Origin recognition complex (ORC) subunit 3 N-terminus (PF07034.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |