Ll_transcript_476120

• Id Trinity: TRINITY_DN47499_c2_g1_i2
• Name Transcript: Ll_transcript_476120
• Sequence: ATTCTATTCAACATTGTTGATTGATGGTAACATTCATGACTTTTGTTGTTCTCCTTCATACTCTTCCTCCTATCCTTTCACGCCTCTCTTTACCTAGTCA AATTCTCTTATTTAGTCAACCCAAATTATCAAGCTAAAGTCTTCTTCTGCCACCTATTATTGTACTATTATATTACACATACATGATACACCACTTTCTA TTCACATTCTTTCTCAATTCCAAGTTCCATTTACATGGCTCATTTGGTTTATAATGAAACTCCTTCTTTCGGAGCCTCACACCATGGCCAAGCTCAACAA ATTATTCCATTCTCAACCACCACTTCCACTTCCTTAAGAATTATCCTCTTACATGGCAACTTAGAGATATGGGTCAACCATGCCAAAAACCTTCCTAACT TGGACAAATTTCACAGGACATTGGGAGATATATTTTCCTTGCCTAAGAAACTTGGTAGCACAATTGAAACAAGTGATCCATATGTCACTGTCTCTGTAGC AGGTGCTGTTATTGCAAGAACTTTTGTGATTGAAAATGATGAGAATCCTGTTTGGATGCAGCACTTTAATGTCCCTGTTGCACATCGTGCCTCTGAAGTT CACTTCCTTGTAAAGGATAGTGATATTGTTGGATCACAGTTGATAGGTGCTGTAGGAATTCCAGTTCAAGATTTATATAATGGTACAAAAGTTGAAGGCT TTTACCCTATCCTTAGCTCTAGTGGAAAGCCTTGTAAGGATGGAGCAGTGTTGAGTTTATCCATTCAATACACCCCTATTGATAAGGTGACCCTTTATAA TCATGGTGTAGGTGCTGGTCCTGATTATGAAGGTGTCCCTGGTACATACTTTCCCCTAAGAAAAGGTGGGAAAGTAACACTTTATCAAGATGCTCATTTT CAAGAAGGTTGCCTCCCAAATTTCAAGGTCAAAGGGGGTGTGAATTATGAGCATAGAAGTTGTTGGCATGATATCTTTGATGCAATTAGCCAGGCTCGTC GATTAGTTTATATCGTGGGGTGGTCTGTGTACTATGATGTTAGTCTGATTCGGGATAATCGTGGCGGAAAAGGCTCCACTTTAGGTGATCTTCTCAAAGC TAAATCACAGGAAGGTGTGAGAGTGTTGCTACTTGTGTGGGATGATCCTACTTCTAGAAGCTTTCTTGGACAAAGGACGGTTGGACTTATGGATACTCAT GATGAAGATACTCGCCGATTTTTCAAGCACTCTTCAGTACAAGTGCTTCTTTGCCCACGTGGTGGTGGAAAGGGACATAGCTGGCTTAAAACACAGGAAG CTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTAGATGCTGATGCAGGTCAGAATAAAAGAAAGATTGTAGCTTTCATAGGGGGTCTTGACTT ATGTCTGGGCCGATATGATACACCAACACATTCTCTCTATAGGACCTTACAAACAACACACAAAGATGACTTTCATAATCCTAATTTTGAGGCTAAACTG GGTCCTGTTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCCAAAGTTGATGGACCTGCTGCATATGACATCCTAACCAATTTTGAGGAGCGCT GGTTAAAAGCAACAAAAAAGAGCAGACTTCATAGGATCAAAAGTTCTCATGATGATTCATTGCTAAAAATTGATAGAATCCCTGACATTATGGGTATTGA TGAAGTTTCCGGCCTAAATAAACATAACCCGGAAACATGGCACGTCCAGGTATTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGGAGCCG AAAGATGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAGTCATAGACATGAGCATACATTCTGCATATGTAAAGGCAATCCGAGCTGCACAAAAGT TCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATTTAATTGGGATTCTCATAAAGACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCACT AAAAATAGCCAACAAAATCAAACATCATGAGAGGTTCTCTGTGTATGTTGTCATTCCCATGTGGCCTGAAGGTGTACCCACAAGTGTATCCACTCAGAGG ATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGATTTACAAGGCCTTACAAGAGGCTGGGCTGGACAATGTGTATGAACCACAGGACT ACTTGAATTTCTTTTGTCTTGGCAATCGTGAAATCTCTGATAATAATGAGAACATTTCAAATGCAGCAAAACGTAATGGACAGAACACTCCTCAGGTACT AGCACAAAAGAACAGGAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGATATTGGGATCTGCAAATATAAACCAAAGG TCCATGGAAGGCACCAGAGACACAGAGATAGCAATGGGAGCATATCAACCTAAACATACATGGGCAAGCAAACGATCTAAACCTCATGGGCAGGTGCATG GTTATAGAATGTCACTATGGAGTGAGCATATTGGAGGCTATGAAAAGTGCTTTGAGGAAGCAGAGAGCTTGGAATGTGTAAGAAGGATAAAGTCATTGGG TGAGTTGAATTGGAAACAATATGCAGCTGAAGAAGTAACAGAAATGAAAAGTCATTTGTTGAAATATCCACTTGAAGTTGATTCAAAGGGTAAAGTCAAG CCTCTACCTGGCTCTGAAACATTCCCTGATGTTGGTGGCAATATAAAGGGAACGTTTTTAGTAGTTCAAGAGAATCTTACCATCTAATTATTTTTATGCA ATTTATGTGGAATTTATAGACTCAGTGAGGAGCACAGGCTCATGTTTTTTTTTATGATATATGATGATTCATATCAAAATAAACAAATGATGTTCTTAGT TTTGGTGTAATTATTTGTCCACATTCTATTGATAGAAAACTATAATTTTTTCTGTAATTGTAGTAAATAAATCTTTTCTTTTTGCAAACTCTGTTTTTAT ATGAAAATAATAAATATTGTCAATGAGTAC
• Tissue: pods
• Gene name: LI_gene_153147;
• Additional information: details;

Expression of Ll_transcript_476120

FPKM

• PAB: 6.4
• PNAB: 3
• PS1: 3.4
• PS2: 1.8
• PS3: 4.1
• PW1: 11.5
• PW2: 9.1
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476120

• Blastp: Phospholipase D beta 1 from Arabidopsis with 71.32% of identity
• Blastx: Phospholipase D beta 1 from Arabidopsis with 71.29% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT2G42010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421976.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;