Ll_transcript_476136

• Id Trinity: TRINITY_DN47499_c2_g3_i22
• Name Transcript: Ll_transcript_476136
• Sequence: CTGGGACTGTGCACGTCGTCAACTGTTGACCTGGCGAGTGCGGGGAGAGCGTTTCACGTTTGTTGGTCTATTGTTGTTCTTCTTCCCCGTCCTTTTTTCC CTATAATCCAAAACTTCTGAGAAGCATCTCAAAGAAAATAAGGTAAAATTTCCCTCTCTCTGCTCGTAAAAATCTCACCTTGGATTGAACACCCACCCTT GATATCACATCAATCTTCCAAATTTTCCATAAATTCCTGTGATCAATCCCAAAGATCATCCTTCCCTTTCCCCTTATTCAAATACAATTGACATAATTGT ATGACCCTTTTGCATTGAAAATCCAAATTTGACTTATTAGTGAGGTTTTTGGTGTTTGTTATATTTGATGGATAACTATGGCTCCTCATCATCATCATCT CCGTACAGGTATCCTAACCCTTATCAACCATATCCTCCTCCCAACCCTTATCCACAATACCCTCCTCCTCTTCCAAATCCAGGTCCTGATCCTTATGCAC CTCATCATTATCCACCTCATCCTTATCCATATCCTTATACTTCTTCACATTCCTTCAACTATTCCTACCCTTCACCTCCTAGATCACCTTTCCCTTCCTC CCATTCTGGCCCCTTGGATTACTCCTCCCATCATCCTCCACAACCTCCTAGGTTAACCTCATCACCCACCCTCCCTCCTGGCCCATTGGATTATCCTTCC TATTCCCCTCCTCATGCTTCCTCGTCCTCGGACTTTAATCACCCTTCGCCGCATTTGGACATTCCTCGGCCTACTTCGGCTTCTTATCCGTACCCGTACT ATGTTGCTCCAGGGACTCATAGTCCTCCTCCTCACCCTTCGTTTTCCCACACGGCTAGTTTGCCATATGGATCATCTCATTACTATTACCAGCAGAGTGA GGCCTATCCACCTCCGGAAGATAGTTCTCAAGCCCATTCGCGGATTAATAGTTGTCCCTACCAATTGGAGAGCGCAAGCTTCATAGGAGGTGGAGTGTCA GTATCACAAAGTAGTAGTATTGATAATTCCAAGCCTTCTTACCCGACTTTGGATGATCTTATGAGCAATGTTCGGTTGTCCGATAACCAGCCAAGTGCTC CTGTGTCATTCTCCCCGGCACCTGCAGCGCAACCATTCATGCATTCCATTTCAGTTCCCAAGTTGCAAGAAAAGAGAGATGAGTTTTATGGCTATTCTAA TAACTCCTTCTCGGGTTGGGGATCCTCTTACTCTGGTCGGGTGGATTCATCTAAACTTTCAGATTTTTCTGACTCATTTAATGGCTCTGTGCATAGTCAA TCAACGCAGATTGTTCCGTTGCAGAATAAAGGGTCCTTGAGAGTTTTACTACTGCATGGAAATTTAGATATATGGATATATGGAGCTAAAAATCTTCCGA ATATGGACATGTTCCACAAAACAATAGGGGATATGTTTGGTAGATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACTATAAATATTACCAGTGATCC TTATGTATCAATTGCAATATCAAATGCTGTAATTGGGAGGACTTATGTTATTAGCAACAGCGAAAATCCTATTTGGATGCAACACTTCTATGTTCCTGTT GCTCATCATGCTGCAGAAGTACACTTTCTTGTTAAAGACAGTGATGTAGTAGGTTCACAGCTCATTGGAATTGTGGCAATTCCAGTGGAAAAAATATTCT CGGGGGAAAAAATAGAAGGTGCTTACCCTCTCCTGAATAACAATGGGAAGCCTTGTAAGCAAGGTGCTTCCCTGAGCCTTTCCATTCAGTACATCCCAAT GGAAAGACTGAGCATTTATCATCAAGGAGTCGGAGCAGGACCTGACTACATTGGGGTTCCTGGAACATATTTTCCTTTGCGGAAAGGTGGAACTGTTACT TTATATCAAGATGCTCATGTTCCAGATGGATCCCTCCCCAATGTGCTGCTTGAAAATGGGATGTATTATGTGCATGGGAAGTGTTGGCTTGACATCTTTG ATGCCATACGTCAAGCTCGGCGATTGATCTATATTACAGGGTGGTCCGTGTGGCACAAAGTTAAGTTAGTAAGAGATACTGCTGGCTTTGCACCAGATTA TACTTTGGGTGAACTTCTGAAAACAAAGTCACAAGAAGGAGTTAGAGTGCTTCTCCTTATTTGGGATGATCCTACGTCAAGAAGCATTTTGGGGTATCAA ACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGGCGATTTTTCAAGCACTCTTCAGTGCAAGTGCTGCTTTGTCCTCGCATCGCTGGAAAACGAC TTAGCTGGATCAAACAAAAGGAAGTTGGAACTATATATACTCATCACCAGAAAACTGTAATTGTGGATGCTGATGCCGGAAATAACAGAAGAAAAATTGT GGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATACGATACTCCCCATCATTCTATCTTTAGGACACTGCAGACACTACATAAAGATGACTATCAC AACCCTACTTTCACAGGTAACACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGCCCAGCAGCTTATGATGTTTTGACTA ATTTTGAGGAGCGCTGGTTAAAAGCTTCAAAGCCTCATGGAATAAAAAAGTTAAAAATTTCATATGATGATGCTTTACTTAGGCTGGAAAGAATTCCAGA TATTATCGGCATAAATGATGCTCCTAGTGTTGGTGATGATGATCTTGAAGCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAGGGA TTTCCGAAGGATCCAAAAGATGCAACTAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTC GTGCTGCACAACATTTCATTTATATCGAGAATCAATATTTCATTGGGTCTTCATTCCATTGGAGTCAACATAAAGACCTCGGTGCTAATAATTTAATCCC TATGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAGGCAAATGAGAGATTTGCTGTGTATATTGTTATTCCTATGTGGCCAGAGGGTGTTCCAACAGGG GCCGCCACACAAAGGATTCTGTTTTGGCAAAATAAAACTATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGTTGGACTTGAAGCAGCGT TCTCTCCACAAGACTATTTGAACTTCTTCTGCCTTGGCAACCGGGAGGCCGTAGATTTGTATGCTAACGTTAGTGTGTCTGGAACTCCACCCCCAGCAAA TAGTCCTCAAGCAATTAGTCGAAATAGCCGACGCTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCA AATATCAACCAACGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCGTACCAACCTAATCATACTTGGGAAAGAAAATACTCTCATCCAC TTGGACAGATCCATGGATATAGGATGTCGCTTTGGGCAGAACATACAGGAACAATTGAAGAATGCTTCTTGCAACCTGAGAGCCTTGAATGTGTGAGAAG GGTTAGAGCAATGGGTGAAATGAACTGGAAACAGTTTGCAGCTGATGAAATATCAGAGATGAGAGGGCACCTACTCAAATACCCGGTTGAAGTTGATCGA AGGGGCCGAGTTAGATCACTTCCTGGCCATGAAGAGTTCCC
• Tissue: pods
• Gene name: LI_gene_153150;
• Additional information: details;

Expression of Ll_transcript_476136

FPKM

• PAB: 5.2
• PNAB: 6.4
• PS1: 10.3
• PS2: 9.1
• PS3: 10.3
• PW1: 10
• PW2: 12.2
• PW3: 15

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476136

• Blastp: Phospholipase D beta 2 from Arabidopsis with 75.48% of identity
• Blastx: Phospholipase D beta 1 from Arabidopsis with 73.3% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT4G00240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433950.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;