Ll_transcript_476111

• Id Trinity: TRINITY_DN47499_c2_g3_i5
• Name Transcript: Ll_transcript_476111
• Sequence: TGTATGTCAATTTATGTGAGATGTTAATATCTTGAATGCTGTAATATTCTACATTATATATTTAATAATTTACCCAAAAGAAAATAGTTTAATTTCACAT CTTACTCTTCCATGATTCAGTCATGTTCGGCCAGAAAAAGAAAGATCCATCTCCCCTGAACTGAATATATCATTGTTCTTCATTTTCTCACCTTCGTAAA CCTTTAAAAAGGTTAAAACTTTCTTTCTCTAACTCATCAAAATCTTCCCTTTGTTGCAAACCCACCACCATTGTTATTCCAATCTTCAAAGTTTTGGCAT AATTTGCATGTGATCACACTCCCAACTCTCGAGTATCAACTACCCTTGGAGCCTGCAAATTTTGTATGTACAACAATTCTTATGCATTAATTCAATTTAT ATTGTTCCTATGTTATTAATTCCAATATTTAATGATCCTTCAATAGTTTTGCTTCTGCATAATCAAGGTTGAGTTAGAATTATAAGTGATAATTCAATTC TGTATTGGAAGTAATGGAGCACAACCATGGATCTTCATCTCCATACAATTATCCAAATCCATATTACCCTCAAAACCCTCATCCTAACCAATATGGTCAT GATCCATATGCTAACCCTCCTCGTCATTATCCATACAACCCTTTACCACATTCCTTCAATTACCCCTACCCTCCACCACCTCAGCCATGCTTTACAGCCC CGCATTCCGGCCCGATAAATTATCACTACCCTCCACCTCATCCACCACCTTCCTCAGCCCCTAATACTGCCTCATTCGACTTTAACCGACCGCCTCCATC ATCCGACTTTTTGGGCCCTCGGCCACCTCGTCCGTATCCTTACCCCTACCAAGCTCCTCCGGAGAGTCATGGTCATCCTCAGCCTCAACCTCGCTTTTCA GTTCATACCGGTTTTGAGTACGGATCATCATCTCCTTACAATTACCAACAGAATGAGGCCTATTCGCAGTCTGGACAGTACTCACACGCGCATAGTGGCT TCGCTGGTCCCTACCAGCAGGAGATGATGAGCTCTGTGGACTACTCCAATCCTTCTCAGGGATCTGCTTACCCGCCTTTGCATGATCTTATGAGCAATGT TCGGTTATCAGACAATAATCAGCCAACTGCTCCTGCATCACCCCCTGCGCCTGCCGTGCACCCATTGCAACATTCCAATTCAGTTACGAAGGAAGAGAAA CCATGGGGGCATTCCAATTCAGTTCCAACAGAAGAGAGGAACCATGACTACCCATTGCAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGC ATTCCAATTCGGTTCCAACAGAAGATAGGAACCATGACTACCCATTACAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGCATTCCAATTC GGTTCCAACAGAAGAGAGGAATCATGACTTTTATGGTTATTCTAATAACTCCTTCTCAGGTTGGGAATCCTCCCCTCACTCTGATCCGGGGAATTCTCCG AATCTTTCAGATTATTCTGGTTCATTTAATGACTCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAATTCAAAATAGTGTGCCGTCTTTAAGAGTTTTGC TCCTACATGGAAATTTAGATATATGGGTTCATGGAGCCAAAAATCTCCCAAATATGGACATGTTCCACAAAACTTTGGGGGAAATGTTTGGTAGAAGACC TGCTGTTTCAAGCACTAAAGTAGAAGGAACAGTGAGTCATAAGATTACTAGTGATCCTTATGTAACAATTTCTATATCAAATGCTGTAATTGGGAGGACT TTTGTGATTAGCAACAATGAAAACCCTGTCTGGGAGCAACATTTCTATGTTAATGTTGCACATTATGCTGCTGAATTGCACTTTGTTGTCAAGGACAGTG ATGTCGTGGGTTCACAGATTATTGGTGTTGTGGCAATTCCAGTGGAACAAATATACTCTGGGGAAAGAGTAGAAGGGACCTACCCTATCCTGAATAATAA CGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGTCTATCCATTCAGTACATTCCAATGGAGAAACTGATCATTTATCATCAAGGAGTCGGAGCAGGGCCT GAATATATTGGGGTTCCGGGCACATATTTTCCGTTGAGGAAAGGTGGAACTGTTACTCTCTATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTGACG TGATGCTTGATAATGGGATGCATTATGTTCACGGAAAATGCTGGGTTGACATGTTTGATGCCATACAAGAAGCTCGGCGTTTGATTTATATTACAGGTTG GTCAGTGTGGCACAGAGTCAGGTTGCTTAGGGATACCCGTAATACATCAGATTCCACCCTAGGTGAACTTTTGAGGATCAAGTCACAAGAAGGAGTAAGA GTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAGAACAGATGGTGTTATGGCAACTCATGATGAGGAAACTCGCCGATTTT TCAAGCATTCTTCTGTGCAAGTTCTGCTTTGTCCTCGTGTTGCTGCAAAACGACATAGCTGGGTCAAGCAACAGGAGGTTGGAACAATATATACACACCA TCAGAAAACTGTAATTGTGGACGCTGATGCCGGAAATAACAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATATGATACT CCTCACCATCCTCTCTTCAGGACATTGCAGACACTGCATAAGGATGATTATCACAACCCTACTTTCACAGTAATATTTTATTTGATAAGCAGAAAATGAG TGGAATTTTAAGCAGATCACATCTATAAAAAGTTCAATTCCAAGTTTAATTGATCTAGAAGTAAAATTGCAGTTAAGAAATATTTCTGCATTCTTTTATA GAAATATCAAAACGACTGTTTCAATCTGTGCATGTTATGTGGGTTCTCAGTGCAGCAACTTTGAACTGCAAGACTAGCGGTGCTAGTGATATGTAAATAA CAATGCAGATTATGTAATGTCAGGGTAATGTTGGTGGCTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAGTTGATGGTCCAGCGGCTTATGATGT TTTGACCAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACTTCAAGGGGGAATAAAGAAGTTGAAAAGTTCATTTGATGATGCATTACTTAGGATAGAA AGAATTCCAGATATTCTCAGAGTGTTCGATGCTCCTAGTGTTGGTGATGATAATCCTGAAGCTTGGCATGGTCAGATATTTCGCTCAATTGATTCAGGTT CTGTTAAGGGATTTCCAAAGGATCCCAGAGATGCATCAATCAAGAACCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGT GAAGGCAATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATTCAATTGGAGTCAGCATAAAGACCTCGGTGCTAAT AATTTAATTCCAATGGAAATTGCGCTTAAGATTGCTGAAAAGATAAGGGCAAATGAGAGATTTGCAGTTTACATCGTTATTCCAATGTGGCCTGAGGGTG TTCCAACCGGGGCTGCTACCCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTACAAGGCGTTGGTTGAAGTTGGGCT TGAAGCAGTATACTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGGGAGGCCATCGATATCTATGAGAATATTGCTGTGTCTGGAAATCCT CCCCCAGCAAATAGTCCACAAGCAACTAGTCGGAACAACCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAT TGGGGTCTGCAAATATCAACCAACGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCGTACCAACCTAATCATACTTGGGAAAGAAAATA CTCTCATCCACTTGGACAGATCCATGGATATAGGATGTCGCTTTGGGCAGAACATACAGGAACAATTGAAGAATGCTTCTTGCAACCTGAGAGCCTTGAA TGTGTGAGAAGGGTTAGAGCAATGGGTGAAATGAACTGGAAACAGTTTGCAGCTGATGAAATATCAGAGATGAGAGGGCACCTACTCAAATACCCGGTTG AAGTTGATCGAAGGGGCCGAGTTAGATCACTTCCTGGCCATGAAGAGTTCCC
• Tissue: pods
• Gene name: LI_gene_153150;
• Additional information: details;

Expression of Ll_transcript_476111

FPKM

• PAB: 0.3
• PNAB: 0.9
• PS1: 1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.2
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476111

• Blastp: Phospholipase D beta 1 from Arabidopsis with 74.01% of identity
• Blastx: Phospholipase D beta 1 from Arabidopsis with 79.95% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT2G42010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461277.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;