Ll_transcript_476116

• Id Trinity: TRINITY_DN47499_c2_g3_i8
• Name Transcript: Ll_transcript_476116
• Sequence: TGTATGTCAATTTATGTGAGATGTTAATATCTTGAATGCTGTAATATTCTACATTATATATTTAATAATTTACCCAAAAGAAAATAGTTTAATTTCACAT CTTACTCTTCCATGATTCAGTCATGTTCGGCCAGAAAAAGAAAGATCCATCTCCCCTGAACTGAATATATCATTGTTCTTCATTTTCTCACCTTCGTAAA CCTTTAAAAAGGTTAAAACTTTCTTTCTCTAACTCATCAAAATCTTCCCTTTGTTGCAAACCCACCACCATTGTTATTCCAATCTTCAAAGTTTTGGCAT AATTTGCATGTGATCACACTCCCAACTCTCGAGTATCAACTACCCTTGGAGCCTGCAAATTTTGTATGTACAACAATTCTTATGCATTAATTCAATTTAT ATTGTTCCTATGTTATTAATTCCAATATTTAATGATCCTTCAATAGTTTTGCTTCTGCATAATCAAGGTTGAGTTAGAATTATAAGTGATAATTCAATTC TGTATTGGAAGTAATGGAGCACAACCATGGATCTTCATCTCCATACAATTATCCAAATCCATATTACCCTCAAAACCCTCATCCTAACCAATATGGTCAT GATCCATATGCTAACCCTCCTCGTCATTATCCATACAACCCTTTACCACATTCCTTCAATTACCCCTACCCTCCACCACCTCAGCCATGCTTTACAGCCC CGCATTCCGGCCCGATAAATTATCACTACCCTCCACCTCATCCACCACCTTCCTCAGCCCCTAATACTGCCTCATTCGACTTTAACCGACCGCCTCCATC ATCCGACTTTTTGGGCCCTCGGCCACCTCGTCCGTATCCTTACCCCTACCAAGCTCCTCCGGAGAGTCATGGTCATCCTCAGCCTCAACCTCGCTTTTCA GTTCATACCGGTTTTGAGTACGGATCATCATCTCCTTACAATTACCAACAGAATGAGGCCTATTCGCAGTCTGGACAGTACTCACACGCGCATAGTGGCT TCGCTGGTCCCTACCAGCAGGAGATGATGAGCTCTGTGGACTACTCCAATCCTTCTCAGGGATCTGCTTACCCGCCTTTGCATGATCTTATGAGCAATGT TCGGTTATCAGACAATAATCAGCCAACTGCTCCTGCATCACCCCCTGCGCCTGCCGTGCACCCATTGCAACATTCCAATTCAGTTACGAAGGAAGAGAAA CCATGGGGGCATTCCAATTCAGTTCCAACAGAAGAGAGGAACCATGACTACCCATTGCAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGC ATTCCAATTCGGTTCCAACAGAAGATAGGAACCATGACTACCCATTACAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGCATTCCAATTC GGTTCCAACAGAAGAGAGGAATCATGACTTTTATGGTTATTCTAATAACTCCTTCTCAGGTTGGGAATCCTCCCCTCACTCTGATCCGGGGAATTCTCCG AATCTTTCAGATTATTCTGGTTCATTTAATGACTCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAATTCAAAATAGTGTGCCGTCTTTAAGAGTTTTGC TCCTACATGGAAATTTAGATATATGGGTTCATGGAGCCAAAAATCTCCCAAATATGGACATGTTCCACAAAACTTTGGGGGAAATGTTTGGTAGAAGACC TGCTGTTTCAAGCACTAAAGTAGAAGGAACAGTGAGTCATAAGATTACTAGTGATCCTTATGTAACAATTTCTATATCAAATGCTGTAATTGGGAGGACT TTTGTGATTAGCAACAATGAAAACCCTGTCTGGGAGCAACATTTCTATGTTAATGTTGCACATTATGCTGCTGAATTGCACTTTGTTGTCAAGGACAGTG ATGTCGTGGGTTCACAGATTATTGGTGTTGTGGCAATTCCAGTGGAACAAATATACTCTGGGGAAAGAGTAGAAGGGACCTACCCTATCCTGAATAATAA CGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGTCTATCCATTCAGTACATTCCAATGGAGAAACTGATCATTTATCATCAAGGAGTCGGAGCAGGGCCT GAATATATTGGGGTTCCGGGCACATATTTTCCGTTGAGGAAAGGTGGAACTGTTACTCTCTATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTGACG TGATGCTTGATAATGGGATGCATTATGTTCACGGAAAATGCTGGGTTGACATGTTTGATGCCATACAAGAAGCTCGGCGTTTGATTTATATTACAGGTTG GTCAGTGTGGCACAGAGTCAGGTTGCTTAGGGATACCCGTAATACATCAGATTCCACCCTAGGTGAACTTTTGAGGATCAAGTCACAAGAAGGAGTAAGA GTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAGAACAGATGGTGTTATGGCAACTCATGATGAGGAAACTCGCCGATTTT TCAAGCATTCTTCTGTGCAAGTTCTGCTTTGTCCTCGTGTTGCTGCAAAACGACATAGCTGGGTCAAGCAACAGGAGGTTGGAACAATATATACACACCA TCAGAAAACTGTAATTGTGGACGCTGATGCCGGAAATAACAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATATGATACT CCTCACCATCCTCTCTTCAGGACATTGCAGACACTGCATAAGGATGATTATCACAACCCTACTTTCACAGGTAATGTTGGTGGCTGTCCACGGGAGCCAT GGCATGACTTGCATTCTAAAGTTGATGGTCCAGCGGCTTATGATGTTTTGACCAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACTTCAAGGGGGAAT AAAGAAGTTGAAAAGTTCATTTGATGATGCATTACTTAGGATAGAAAGAATTCCAGATATTCTCAGAGTGTTCGATGCTCCTAGTGTTGGTGATGATAAT CCTGAAGCTTGGCATGGTCAGATATTTCGCTCAATTGATTCAGGTTCTGTTAAGGGATTTCCAAAGGATCCCAGAGATGCATCAATCAAGAACCTAGTAT GTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCAATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCAT TGGGTCTTCATTCAATTGGAGTCAGCATAAAGACCTCGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTTAAGATTGCTGAAAAGATAAGGGCAAAT GAGAGATTTGCAGTTTACATCGTTATTCCAATGTGGCCTGAGGGTGTTCCAACCGGGGCTGCTACCCAAAGGATTCTATTTTGGCAGAATAAAACAATGC AAATGATGTACGAGACAATTTACAAGGCGTTGGTTGAAGTTGGGCTTGAAGCAGTATACTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCG GGAGGCCATCGATATCTATGAGAATATTGCTGTGTCTGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAACTAGTCGGAACAACCGACGTTTCATGATT TATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAATATCAACCAACGCTCTATGGAAGGAACAAGAGACAGTGAGA TTGCAATGGGAGCGTACCAACCTAATCATACTTGGGAAAGAAAATACTCTCATCCACTTGGACAGATCCATGGATATAGGATGTCGCTTTGGGCAGAACA TACAGGAACAATTGAAGAATGCTTCTTGCAACCTGAGAGCCTTGAATGTGTGAGAAGGGTTAGAGCAATGGGTGAAATGAACTGGAAACAGTTTGCAGCT GATGAAATATCAGAGATGAGAGGGCACCTACTCAAATACCCGGTTGAAGTTGATCGAAGGGGCCGAGTTAGATCACTTCCTGGCCATGAAGAGTTCCC
• Tissue: pods
• Gene name: LI_gene_153150;
• Additional information: details;

Expression of Ll_transcript_476116

FPKM

• PAB: 3.3
• PNAB: 7.7
• PS1: 11
• PS2: 4.2
• PS3: 5.7
• PW1: 5.7
• PW2: 5.7
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476116

• Blastp: Phospholipase D beta 1 from Arabidopsis with 76.83% of identity
• Blastx: Phospholipase D beta 1 from Arabidopsis with 76.83% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT2G42010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461277.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;