| Id Trinity | TRINITY_DN47499_c2_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_476118 |
| Sequence | TGTATGTCAATTTATGTGAGATGTTAATATCTTGAATGCTGTAATATTCTACATTATATATTTAATAATTTACCCAAAAGAAAATAGTTTAATTTCACAT CTTACTCTTCCATGATTCAGTCATGTTCGGCCAGAAAAAGAAAGATCCATCTCCCCTGAACTGAATATATCATTGTTCTTCATTTTCTCACCTTCGTAAA CCTTTAAAAAGGTTAAAACTTTCTTTCTCTAACTCATCAAAATCTTCCCTTTGTTGCAAACCCACCACCATTGTTATTCCAATCTTCAAAGTTTTGGCAT AATTTGCATGTGATCACACTCCCAACTCTCGAGTATCAACTACCCTTGGAGCCTGCAAATTTTGTATGTACAACAATTCTTATGCATTAATTCAATTTAT ATTGTTCCTATGTTATTAATTCCAATATTTAATGATCCTTCAATAGTTTTGCTTCTGCATAATCAAGGTTGAGTTAGAATTATAAGTGATAATTCAATTC TGTATTGGAAGTAATGGAGCACAACCATGGATCTTCATCTCCATACAATTATCCAAATCCATATTACCCTCAAAACCCTCATCCTAACCAATATGGTCAT GATCCATATGCTAACCCTCCTCGTCATTATCCATACAACCCTTTACCACATTCCTTCAATTACCCCTACCCTCCACCACCTCAGCCATGCTTTACAGCCC CGCATTCCGGCCCGATAAATTATCACTACCCTCCACCTCATCCACCACCTTCCTCAGCCCCTAATACTGCCTCATTCGACTTTAACCGACCGCCTCCATC ATCCGACTTTTTGGGCCCTCGGCCACCTCGTCCGTATCCTTACCCCTACCAAGCTCCTCCGGAGAGTCATGGTCATCCTCAGCCTCAACCTCGCTTTTCA GTTCATACCGGTTTTGAGTACGGATCATCATCTCCTTACAATTACCAACAGAATGAGGCCTATTCGCAGTCTGGACAGTACTCACACGCGCATAGTGGCT TCGCTGGTCCCTACCAGCAGGAGATGATGAGCTCTGTGGACTACTCCAATCCTTCTCAGGGATCTGCTTACCCGCCTTTGCATGATCTTATGAGCAATGT TCGGTTATCAGACAATAATCAGCCAACTGCTCCTGCATCACCCCCTGCGCCTGCCGTGCACCCATTGCAACATTCCAATTCAGTTACGAAGGAAGAGAAA CCATGGGGGCATTCCAATTCAGTTCCAACAGAAGAGAGGAACCATGACTACCCATTGCAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGC ATTCCAATTCGGTTCCAACAGAAGAGAGGAATCATGACTTTTATGGTTATTCTAATAACTCCTTCTCAGGTTGGGAATCCTCCCCTCACTCTGATCCGGG GAATTCTCCGAATCTTTCAGATTATTCTGGTTCATTTAATGACTCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAATTCAAAATAGTGTGCCGTCTTTA AGAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCATGGAGCCAAAAATCTCCCAAATATGGACATGTTCCACAAAACTTTGGGGGAAATGTTTG GTAGAAGACCTGCTGTTTCAAGCACTAAAGTAGAAGGAACAGTGAGTCATAAGATTACTAGTGATCCTTATGTAACAATTTCTATATCAAATGCTGTAAT TGGGAGGACTTTTGTGATTAGCAACAATGAAAACCCTGTCTGGGAGCAACATTTCTATGTTAATGTTGCACATTATGCTGCTGAATTGCACTTTGTTGTC AAGGACAGTGATGTCGTGGGTTCACAGATTATTGGTGTTGTGGCAATTCCAGTGGAACAAATATACTCTGGGGAAAGAGTAGAAGGGACCTACCCTATCC TGAATAATAACGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGTCTATCCATTCAGTACATTCCAATGGAGAAACTGATCATTTATCATCAAGGAGTCGG AGCAGGGCCTGAATATATTGGGGTTCCGGGCACATATTTTCCGTTGAGGAAAGGTGGAACTGTTACTCTCTATCAAGATGCTCATGTTCCAGATGGCTGC CTCCCTGACGTGATGCTTGATAATGGGATGCATTATGTTCACGGAAAATGCTGGGTTGACATGTTTGATGCCATACAAGAAGCTCGGCGTTTGATTTATA TTACAGGTTGGTCAGTGTGGCACAGAGTCAGGTTGCTTAGGGATACCCGTAATACATCAGATTCCACCCTAGGTGAACTTTTGAGGATCAAGTCACAAGA AGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAGAACAGATGGTGTTATGGCAACTCATGATGAGGAAACT CGCCGATTTTTCAAGCATTCTTCTGTGCAAGTTCTGCTTTGTCCTCGTGTTGCTGCAAAACGACATAGCTGGGTCAAGCAACAGGAGGTTGGAACAATAT ATACACACCATCAGAAAACTGTAATTGTGGACGCTGATGCCGGAAATAACAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCG ATATGATACTCCTCACCATCCTCTCTTCAGGACATTGCAGACACTGCATAAGGATGATTATCACAACCCTACTTTCACAGGTAATGTTGGTGGCTGTCCA CGGGAGCCATGGCATGACTTGCATTCTAAAGTTGATGGTCCAGCGGCTTATGATGTTTTGACCAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACTTC AAGGGGGAATAAAGAAGTTGAAAAGTTCATTTGATGATGCATTACTTAGGATAGAAAGAATTCCAGATATTCTCAGAGTGTTCGATGCTCCTAGTGTTGG TGATGATAATCCTGAAGCTTGGCATGGTCAGATATTTCGCTCAATTGATTCAGGTTCTGTTAAGGGATTTCCAAAGGATCCCAGAGATGCATCAATCAAG AACCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCAATTCGTGCTGCACAACATTACATTTATATAGAGAATC AATATTTCATTGGGTCTTCATTCAATTGGAGTCAGCATAAAGACCTCGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTTAAGATTGCTGAAAAGAT AAGGGCAAATGAGAGATTTGCAGTTTACATCGTTATTCCAATGTGGCCTGAGGGTGTTCCAACCGGGGCTGCTACCCAAAGGATTCTATTTTGGCAGGTA TGCTTCAACTCACAATACAAAGGCCAATTTTGTATTTTATTGAACTTTTAGAATATCGATTTTATAGGTGGAACCCTTCTTGATAAATTGAGATTTCAAA CACCCAGCCCACCTATTGTATTCTCTTCTCATCATTTTCTACCTTTTCGTAATAAATAGCATTTTCGACTTTTCGGAGTCGCTGGGTTGACATTTTTTAG TCAGAGATGTAATGATAATGCTCAGAAAAATGATAATTATAAATTTTTAACTTTATTTTTCTAATTTCACTGGTTGAATTTTGAAGTACTTTTTTAAATG ACAGACCTATGATGTTGTCATTTAGAAGCAATTTATCTCGGCCTTCCTTCTATGAAATGTGTGAATCATGTCTTTCAACTATTATAATGCCATCAGTTTT GATGTTAGAAATATCATGCTATCATTATAAATATTAAAGAATCCTAAAGTTTCTATTTTATTACCTTTATTATTTCATCATTATAAATATTAAAGAATCC TAAAGTTTCTATTTTATTGCATGATGTCGAAGTAAAAGTTATATAGCACATGTTAGTGCTTGGTTTTTTCACTTTTTATTACGCCAGATTATTTGTTTGA TAAATCTTTTCAGAATAAAACAATGCAAATGATGTACGAGACAATTTACAAGGCGTTGGTTGAAGTTGGGCTTGAAGCAGTATACTCTCCACAAGACTAT TTGAACTTTTTCTGTCTTGGAAATCGGGAGGCCATCGATATCTATGAGAATATTGCTGTGTCTGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAACTA GTCGGAACAACCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAATATCAACCAACGCTC TATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCGTACCAACCTAATCATACTTGGGAAAGAAAATACTCTCATCCACTTGGACAGATCCATGGA TATAGGATGTCGCTTTGGGCAGAACATACAGGAACAATTGAAGAATGCTTCTTGCAACCTGAGAGCCTTGAATGTGTGAGAAGGGTTAGAGCAATGGGTG AAATGAACTGGAAACAGTTTGCAGCTGATGAAATATCAGAGATGAGAGGGCACCTACTCAAATACCCGGTTGAAGTTGATCGAAGGGGCCGAGTTAGATC ACTTCCTGGCCATGAAGAGTTCCCTGATGTCGGAGGGAAAATAGTTGGATCATTTCTTGCAATGAAGGAGAATCTAACCATTTGATGAATTATCACTTTT TGGTCTCACATTAATAGTCAATCCTACCGGGTGGAATTAAAGTGTGATTGTTTTTGTTGGTCTTTCACATCAAGATGAATGTAAATTACAAAATAGAAGT TGAATGATTTTGAAATGGGTAATAGTAAATAAAAAGAGTGTATAGTCATAAACACGTTTTGTATGCTGTACGAGGATTAACAAAACTATAGAGCACATTC TACATTATCATGCTAGCACTGAGAGAGAAAATAAGCCCCCAATGTCTGGCTTTTATGCATATATACATTATCAGCATATGTGAATATTGGAATCATATCA GCCATAACAGTTGGCATATTGTGTTCCTTATTTTTGCTAGTTATATAACTGCATTCTTTATCCTTCCCATAGTAGGAATATGAACTAATTTACCAATTGA ATCTGCAGTACGATTGTAATAATAGTGGTTGATGGTAACCAATGCCTAAAGACACCTGGTCAGTGTGAGAAGTGAGAAGTGAGGAAGAGAATGATGTAAC TTGACTATATCATGGTGCTAATAGAATTGTCCGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153150; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_476118
| Blastp | Phospholipase D beta 1 from Arabidopsis with 63.47% of identity |
|---|---|
| Blastx | Phospholipase D beta 1 from Arabidopsis with 77.42% of identity |
| Eggnog | Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502) |
| Kegg | Link to kegg annotations (AT2G42010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461280.1) |
| Pfam | C2 domain (PF00168.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |