| Id Trinity | TRINITY_DN47501_c0_g5_i5 |
|---|---|
| Name Transcript | Ll_transcript_525888 |
| Sequence | CCTATCCCTATTTTTCTCTCTCTCTTCTTCGTTGAATCTCAGATTTCGCGAACCATGTACAACGGAATAGGGTTACAAACTCCAAGAGGTTCTGGCACCA ACGGTTACATTCAGAACAACAAATTCTTCGTCAAACCCAAAACCTCCAAGGTTTCCGATCGAGGCTTCGATTCAGATCAGGGAACTGCTGGTGTTACCAG AAAGCCAAACAAGGATATTCTCGAACATGATCGTAAGCGTCAGATCCAACTCAAGCTCGTTATCCTTGAAGAAAAACTCATCGATCAAGGTTATTCGGAG GTTGAGATCGCTCAAAAGCTTGATGAAGCGAGGAATAATTTGATAGCTTCTGCTAATGATGATCAGGAATCTGATGTTAATGGACAGAACAAGATTTCCG AGACCCAGACACATCAAATTGCTGCTAGAAAGGAAAAACAGATGGAAACATTAAAAGCTGCTCTTGGCTTAGTTTCAGCGTCTGAGGTTGATGAAACAAA TGCTCTTCAAAATGATGATGGAAAAAATGGTTCTAATGCAGAGGGTAGGCATCAGTTGAAGGAACATTCCTTTTTGGACAGAGATTTCAGTCGGAAGAAA CAAACAGTTGAAGATCAGAAAGATGAAAGTGCTTATAAGAAGGCTGTTAAAGATTCAAGGCGCCAAAAGAAAGGTGGAAAAAAGAAAAAGTACACAGATG TTTCATCCGATCTGGACAGCAGTACGGACGAGGACAAGGGAGATAGAAGGAAGCAACGTAAAGGCAGGAAGGAAAGTAGTGATGATTCTGATAGTGATAC GGAGAGGAAGGTCAAGGCTATGCGGAAACGTAAGACATCTAAGCAGCACAAGAAACACAAGGTAAAGGATAGTGATGAATCTGATGAAACTGCTTCTGAT TCTGATGACAGCATCTCTGTAAGAAAAAGTAATTATAAACACAAAAAATCTCTGAAGAGGCATGACTTAGATGATGATTCTGATCACCATAAAGGCCTCT CCAAACATAAACGAGACCTGAATCAACATACAAAGATCAGAAAACCTCAAGAGTCTGAGGAGGAATCTGATGCTGATAGTGAGGAGGAGAAGAAATATGG GAGTAGATTGGAGAAGAAAAATAAAGTAGAATCTGATGCTGATAGTGAGGAAGAGAAGAAATATGGCAGTAGACTTGAGAAACAAAAGAAAGGGAGGCAT GATTCTGGCGATGAAGATTCTGATGGAGACTATGGTAAGCGTGTTTCAAGGGAAGACAGATACGTTGGAGGGGGGTCATACTCTTCAACTGACGACAGTG ACAATGGTTCAGATAGTAGTCCTAGTTATCACAGAAATGAAAGAAAAAGTGAACATAGGGAGGTCAAGCATGGACAGGATGTGGATGATCGTACAGGAAG AAAGCACAGAGGGGGTGATGATTACCATGGACAAAGAAAACATAGAAAGGATGAGGACAATTACGGGGAAAGAAAGCACCTGAAGGATGATGAAAATATT GGGGAAGGAAAGCACTCAAGGAATGAAGACAGTCGTGGGGAAAAAAAGCATTTGAGGGGTGAGGACAATCATGGAGAAAGAAAGCTTGCAAGGGAGGAGG ATTTTCGTGAAGAAAGAAAGCACACAACAAGGGAGGAGGACATTCGTGGAGAAAGAAAGCTCGCAACAAGGGGGGAGGACAGTCGTGGTGAAAGAAAGGC TGCAAGGGAGGAGGACAGTCGTGGTGAAAGAAAGGCTGCAAGGGAGGAGGGCAGTCGTGGTGAAAGAAAGCCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153166; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525888
| Blastp | Serine/arginine repetitive matrix protein 2 from Mus with 41.22% of identity |
|---|---|
| Blastx | Serine/arginine repetitive matrix protein 2 from Mus with 41.22% of identity |
| Eggnog | serine arginine repetitive matrix(ENOG4111F3M) |
| Kegg | Link to kegg annotations (75956) |
| CantataDB | Link to cantataDB annotations (CNT0000495) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437681.1) |
| Pfam | cwf21 domain (PF08312.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |