Ll_transcript_527390

• Id Trinity: TRINITY_DN47504_c0_g1_i4
• Name Transcript: Ll_transcript_527390
• Sequence: AGTGAAGCTCGTTAAAGCAAGGCCCATCACTTGTCTACTTAGAATTCCATGTTTCTAAACCCTTGTTCTCTTTTGTTGTTGTTTATCTCTCTCTCTCTCG TTCTCCCAATTCCACAGCATCTCAAATTATCTGATCCATCCAGGACCAATGGCAAACTACGATCTAACCACGCGGATCGCACCAAATCTAGACAGGCACC TTGTTTTCCCTCTTTTAGAATTCTTGCAGGATCGTCAGATGTATGATGATGACCACATATTGAAGGCGAAGATTGAGCTCTTAAACAAGACCAATATGGT TGATTATGCTATGGACATTCACAAGAGTCTCTACCATACTGAAGAGGTTCCTCAAGACATGGTGGAAAGGAGGGTGGAAGTGGTTGCCAGGCTCAAGTCC CTAGAGGAGGCCGCTGCGCCGCTCGTTTCATTCCTGCAAAACGCTGCTGCTGTCCAGGAGTTGAGAGCTGACAAGCAGTATAATCTCCAGATGCTCAATG AAAAATATCAGATTGGTTCTGTCCAAATAGAGGCGTTATATCAATATGCCAAGTTCCAATTTGAGTGTGGTAACTACTCTGGTGCTGCTGATTATCTTTA TCAGTACAGGGCTTTGTGCACAAACAGTGAAAGGAGTCTAAGTGCATTGTGGGGAAAGCTGGCGGCTGAAATATTGATGCAAAACTGGGACATTGCTCTT GAAGAGTTGAATCGTCTAAAGGAAATCATTGACTCGAAGAATTTTGCATCTCCTTTGAACCAGGTGCAAAGCCGGATATGGTTGATGCATTGGAGTCTAT TCATCTTTTTCAACCATGATAATGGAAGAACACTGATAATTGATCTGTTTAATCAGGACAAGTATCTAAATGTGATCCAAACTAGTGCTCCACACCTTTT ACGATACCTGGCCACAGCATTTGTTGTCAACAAGCGCCGCAGGCCTCAATTCAAAGATTTTATTAAAGTTATTCAACAAGAGCAGCATTCATACAAGGAT CCCATTACTGAGTTTTTGGCATGTGTTTACGTCAACTATGACTTTGATGGGGCACAAAAGAAGATGAGAGAGTGTGAAGAAGTAATTCTCAATGATCCAT TCCTTTGTAAGCGAGTTGAAGAAAGCAACTTTTCTACTGTACCACTAAGGGATGAGTTCCTTGAAAATGCTAGGCTATTTATCTTTGAGACATACTGCAG AATACACCAACGCATTGACATGAGAGTTCTTGCCGAGAAGTTAAATTTGAATTATGAGGAGGCTGAGAGGTGGATCGTGAATCTAATTCGTGGCTCAAAG CTTGATGCAAAAATTGACTCTCAAACAGGAACGGTTACCATGGAACCCAATCATCTTAATGTGTATGAGCAGTTGATTGACCATACCAAGGCTCTTAATG GACGTACTTACAAGTTAGTCAGCCAACTTCTGGAGCATGCTCAAGCCCAGGCAGCCCGATAATGGCTTGTAGATTCACCGGAAATGTTGTCAGATATCTG GAATTAGTTTTGGACTTAGAATTACATTTGAATTTATGGTCTGTAATCTTTCTAGGAAATGATTTTTCTGATAGCTCAAGGATTTGCTTAAATTGTTTGC TACA
• Tissue: pods
• Gene name: LI_gene_153191;
• Additional information: details;

Expression of Ll_transcript_527390

FPKM

• PAB: 2.8
• PNAB: 8.1
• PS1: 7.2
• PS2: 11
• PS3: 8.9
• PW1: 8.6
• PW2: 8.4
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_527390

• Blastp: Eukaryotic translation initiation factor 3 subunit E from Arabidopsis with 85.52% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit E from Arabidopsis with 85.52% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XQK5)
• Kegg: Link to kegg annotations (AT3G57290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417248.1)
• Pfam: eIF3 subunit 6 N terminal domain (PF09440.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;