Ll_transcript_525994

Id TrinityTRINITY_DN47509_c4_g1_i12
Name TranscriptLl_transcript_525994
SequenceCTTGTCGAGTGTTAAGGTTCCACATAAGAAGAGTAGCCAACAAGTATTTAAATAATCCGAGACAATGAGCTTTGGGATGTGAGCTTAGGGTTAACTTTGA CCCATAACTAAAGGCCATTTCAACACAACCGGAAAAAAGTTGGGCAAGAAGTTGGACTCTGGTATTTAAACCATTCGTGAGACAATGAGGTTTCTTGTGG ATGTGAATTTGAATACAACACAATCGTAATTAGCTTCATTGATAGAGAATTTTTTTTTTCTTTTTTTACTTATGAGTTATGATGTATGCTGGAATGTTGA AAACTGAAATATCTTTGCATTAATGAAAGATGATGACTTTGTAATATGAATTTAAGTGGATATGGGTGTTTCTGGTTCATTAGATTTGATTGGAGGGGCG AATAACATGGGATTTGTATTTTGTGCTTTATGTGAAGTGCAAACAAAGCTAGGGAGTGACACTGGGTTGGCTTCTAAACATTGCTAAGTGTTATTCTGCA TTATCTATATGGGATTTTTCGTCACCCAAAAATTCTCAATTTTCTCTGAATTTTGCTTACCAGGATCCACAGAGCAGATAAAGGATGCCCTTGACTTTTT CACTGGAAGGTCAACTTTTTGAATAATTAATATTTGCTCTATTAAATAAAATTAAATCAAGTCTAGTCCATTTGATTTTTGGAAATGAGAAAGGATATTT AGGAGTGTCTTATTAAGTTGTGCACTTTATTCATTTTGTTTACTTTCAAGTTTCTGAGCACCAGTTGAAGGATTAAATATTGCAGACTAGGAGATGTGGA ATTTGTGGTATGCCGAGATGAGAGTGGGAAGGTTCGTGCCTTTCACAATGTCTGCCGTCATCATGCCTCTCTTCTTGCTTCTGGAAGTGGACAGAAATCG TGCTTTGTATGTCCTTACCATGGGTGGACATATGGTTTAAATGGAGCACTTCTTAAGGCAAATAGGATATCAGGAATGCGGGATTTCAATGTTAAAGATT TTGGGCTTATACCAATCAAGGTAGCTACCTGGGGGCCTTTTGTTCTTGTCAATCTTGAAAAGGAGAGTCTTTCCCAGAATGAAGTTGATAGTCACAATGT TGCAAGCGAATGGCTTGGTAGCTGTTCAGAAATACTGAGTACCAATGGAGTTGATTCTTCACTAAGTTATGTTTGTAGACGTGAATACACTATTGAATGC AATTGGAAGGTATTCTGTGATAACTACTTAGATGGTGGCTATCATGTGCCATATGCACATAAAGGCCTAGCATCTGGTCTTAAGCTTGATTCCTATTCTA TCTCAGTATGCTTCTTTACTACCCTTTTTCTGTTAAATAAGAATATCTTCATTTTACATGCCACTGTACAACATGACAAATTGAGTCATGTACCTATGTC ATGTGCAACCTTCCAGCCTTTCTTGCGCCATCCAAAAAAACATCTCTCTCTTCTCAGTTTATTTTGTGATATCTAATTAATTTGCTATAATAAGTTAAAA TAACAGAGGACCCTGGAACTGGATTTTCAGATGTTCTTTGTTAGGGATTGTTTATGTACTAAAGATTGGTATGAATGAGACAGATGTTTGAAAGGGTTAG CATCCAAAGTTGTGAAAGCAACTCCGGGAAGAGCGAAGAAAATTATGACCGACTTGGAAGAAAGGCTATATATGCTTTTATTTATCCAAACTTCATGATT AATAGGTATGGACCTTGGATGGACACCAATCTCGTACTTCCACTAGGACCCAACAAATGTCAAGTAGTATTTGACTACTATCTTGATCATTCTCTAAAGG TAATTTGTAGTTAAGTAAGGACATACCTAATACTTGTAACATGATTCAAGGTGATCATTCTATCCATGATTCAGTGTGTCTGCTACTAGAGTTGCCTGGT GCTAACTTGCTAATTCTATAGGTTCTGGGGGATGAACACTGATGGTTATACCGTTATACAAAGATATGTTGTGATTTCCTGCATGGGTCTTTATTCTGGA AAAAAATTGTTGACATTTTTTTGTCAACGGGACAATTTTTTGGGGAGATGCATAATAATTAGATCCTGCTCAATTCAGCATCAAAATTATTATTTCAATT ATTATAATGAATCTTTTAAAAGGGCAGCCTGGTGCGCAAGGCTCCCATCACGAGCGAAGAGGTTGTTTTGCTCACTGTATATTTAGGGATTAAATTTGGA AGAAACATAGGGAACAAGAAACTTAGAATTACCCCTAGTTGATGACTAGGTTATCGAATGTTAAGAAATGAAAATTTCCGAGATTTACTTTCATATTTTG AATGACTCCGTCCAAACACAGCTTTCTTGCTTTGATGGATTCTGTGTAGAAGACAGTGAAGCCATAAGGTCAAGTTATGCCAAGCATACTGCATTATCAG ATTTTTCAGAAATTTAACCAGGATTGACATGCCCATTTCAATATCTATGTAGTTCCTCATAGATATGAGCCTTTTCTGTTCTCTTAAATGAGTTTAAATT CTATGTATCATAGGTTAGAGCATACTTTCAATTTAAAGAATTAACTGCTACAGCCTTTTGTTTGTCTAAGCAGGATGACAAAGATTACATTGAGAATAGT TTACAAGATAGTGAAATCGTGCAGGTACAAACATTAATTTCGTAGATTTGGCTAGAAATTCCCGGAGTAATTTATCTGTCGTTCATTTGCAGATGGAAGA TATTGTGCTGTGTGAAGGTGTCCAGAAGGGCCTTCAGTCCCCAGCATATTGTGTGGGGAGATATGCTCCTAGAGTTGAGCAGGCCATGCACCATTTTCAT TGTCTGCTTTATGAAAACCTTACAAAATAATTTCCCTTCATTACACTACTACATATGCTAAAGGCTATAGTAAATTACTGCACCAATTAATACTTGCTCT GGGCTTTTGTCTGAATTTGAAATTGATACACATCTTGTCTCATTAGCAATAATAGTTGCATTATGGATATGTTGCTGAACATGTTAGTTTTAAAATACTG AGCATCATTGTGGCTGATTCTCAATAATTCATATCTGCCATTGTAATTACACCATTGGATGTAAATATGCAATTGTCTGAACTTATGTTGATTCACTAAA ATTTC BLAST
Tissuepods
Gene nameLI_gene_153246; 
Additional informationdetails; 

Expression of Ll_transcript_525994

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_525994
BlastpCholine monooxygenase, chloroplastic from Arabidopsis with 59.82% of identity
BlastxCholine monooxygenase, chloroplastic from Arabidopsis with 65.91% of identity
Eggnogrieske 2fe-2S domain-containing protein(COG4638)
KeggLink to kegg annotations (AT4G29890)
CantataDBLink to cantataDB annotations (CNT0000705)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463425.1)
PfamRing hydroxylating alpha subunit (catalytic domain) (PF00848.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;