| Id Trinity | TRINITY_DN47525_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_525464 |
| Sequence | CTTGTAGTTTGTAACATGACTACCTTGCACGCCGTAAAGGCATTTGATTCACTTCGTTACGTAGTTTGTCAGTTTTTATATTAATTTTATACGAAATATT TTTACGGCGCACCAATGTATGATACGCTATTTGGTATGTATATGTAGGATAAATGAAAGAATTATGTAATACACCTTAACTTCTGGTGTTGGGGTATTGG AGCATGATCACCACACTTGGTGGCTGCAAGAGGCAAGTGGGCATTATCACATTGTTTTCCCATTTTGCCTTTTAAATTTGAATCTTCTCTATATCTCTCT CCACACTTGCTTCACTCACTCTTCATACTCACAATGGAAAGTGGACTACCCTTGCTTAATTGTCTCTTGCAGCAGACATTGAGAAGCATTTGCTCCTCTC AAAATTCATCCACTTCTTCTAAGTGGGGTTATGCTATCTTCTGGAGGATATTACCAAGAAACTTTCCTCCACCAAGGTGGGAATTCGGTGGCACGGCGCT TGATCGTTCGAAGGGGAATAAAAGGAACTGGATTCTTGTGTGGGAAGATGGGTTCTGTGATTTTAATGAATGCGAACAAAGGAAGAGTGGATGCTTGAAC AATGGGTTTGGAGCTGATTTATTCTTCAAAATGTCTCATGAGGTTTACAACTATGGGGAGGGAATAGTAGGAAAAGTGGCCTCAGATAATGGACACAAAT GGGTTTACAGTGATGACACTCATAATGAGTGTGAACCTAGCTACATTGCTTCATGGAATGCTTCAATAGAGCCACAACCAAAGGCATGGGAGTTTCAGTT CAAGTCAGGTATTCAGAGTATTGTAGTAATTGCTGTTAGAGAAGGGGTAGTGCAACTGGGGTCTTTTAACAAGATTGCAGAGGACCTCAATCTAGTGATC ACTATACAAAGAAAATTTAGCTACCTCCAAAGCATACCAGGAGTTTTTGCTATCCAAAGACCATATATTCTGAAGCCAAGTTTCCAAATGATAGAAACCA TGAGTAATGGAATGCCTCTATCTTCCGATGATTCGAGCCGAGTCACCGGACTCAATAGACTACAAGCCCTTGACTTGGGTTGGAACCACCCTCAGAATGG AACAGCAGGACCACCTTTTTGGTCAGGTCCTCCTACACTGCCTAACATGTCTTACAACCTTGGAAATCTACTATCCAATATCTTTCATGTCCCTAATACA GAGACGCAAAACAGTGGCGAGAGAGTGAAGATTGAGGATGATGGTGATGGTGATAGAGGATTAGTAGGAGAATTTAGTAGGAGGATATAACATTACTCTT TCTCCCACTGGTACACACACAACACACACATTAGAATTGTGTGGGGTATGTTTATTGGTGGCCGACAATGTTTCAATCATTGAGATGCACTAGTACTGTT TCTTTCTTCACATTTATTTATCTATGCTAATGATCAACCAATGCAGATACAATTTTTGCAATTTCATTTCTGTACAATATTTCTTTCACATATCAATGCA ATGCAGACATTGCTGTTACCTAACACCCTGCAACCAAATTAATAGAAGCTAATAATTGAAAGAGAGAAAAATGTTTAGTATATGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153349; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525464
| Blastp | Protein RICE SALT SENSITIVE 3 from Oryza sativa with 40.3% of identity |
|---|---|
| Blastx | Protein RICE SALT SENSITIVE 3 from Oryza sativa with 41.76% of identity |
| Eggnog | NA(ENOG410YAU9) |
| Kegg | Link to kegg annotations (4350435) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437929.1) |
| Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal (PF14215.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |