Ll_transcript_526825

• Id Trinity: TRINITY_DN47526_c0_g1_i1
• Name Transcript: Ll_transcript_526825
• Sequence: GTTCAAAACAGAAGTAGCAATAATGTCATGAATCCAATTTATCCAAAGAACCAACCTTTCACTTTCACTACTTCACACGATAAATCATAATCAGCATGAT TCATCTTCTCTCTCAATCATCGATTCAACTTCTCTCTTTTTCCCAAAAGGTTTGAGATCAGAAAAAAACATATATAATTATATCACCCACTCTAAGTTAT GTACTTGATCTGTATCTGCAATTCAGCATTTGTTTAGGGTTAGGGTTTCAGCATCGGTAGGGTTTCTCGGATTTTTTCTAAAATTCCTTTTGGGATTAGT GAAATTCGAGGAAAAGGGTGTTTTGGGTTTGTGTTTGATTAGTCAATTAGCGATGCAATTTAGACGGCACGAAGAAGAGCATGTTCCTGCTGCACTGTCT CCTTCAAAGTTGCGATCTCAGCACCGGTTCGGACCGGGTCCTGAGCCGAACCAGATGAATCGCCGCAATGGTTTGGATCCAGTACAGCAGAGGAATTTAA GTCCACGGAAAATGGATGAAGTAAGAAGGGGGTGTGATGGGTTTGAAAAGAGGGATTTTGATTGGCAATTGGGTGGCCGTAGGAGCGGTAGGTTCCGGCA GCAATTACCTGTGGATGAAGAATTTAGAAAAAAGTCACATTTGGGATTGAGACCAAGATATGAGGTGGCAAATTCCATGGATTATGTTGTTGATGATGAA CATTTGAATGTGAAGCACAGTTATGTTAATAGAGAGAAGGATTTGATTGAAAACAGGTTAGGTTGTGGAGTGGATATGATGGATCATAAGTATGTGATCC GTGAAGATGAAGCGAGAGGTTCATATAGCTCAATTCCAGATATGGGTGTAAATGTAACATCACGATATGAAGAAACTGGTGGGCACTTGCCTCGGCCGCC AAGGGGTATTCCCATGGGGAGATTTGACCATGAAAGATTACAGCACCCAGAATCTCTACCTATGGATAAAATACCCATCACTGAACCCCACAATGAGGCA GAAAAAATAATATTTTATGACAGAGATGGCTCGTACGCGACAATATCCCCCTCATACACAAAGGATTTTGCAGGAACTTCTCACTCGATGGAGAGGGATT ATGGAGGCTCCTCTGTAGAAATGTCAAGGAGTCATTTTCGATGCTCGCATGGTGATGACATATATTTACCTACACCTTATGATCTGTCAAAGAGCGGCAC AGAATTTGCAGAACCTGTAGGGTTTAGCGAACACGGGCAAATGCCACTTGAAGACACTACTAGAGATCCTGAAATTAGGCATAGAAATATGATGTGTCAC CAAGGATGTGAGTTTGGTCCTACCAGGACTGAGCATCAGGATTATCTTAATAATTCTAAAATACCGGTAAGAGCGTCACAGGATGAGGGTGTATATCAGT ATGATGATTTACCAAGAAGGATGGCTCCTCATGGTCGATTAGACTATAATCATTCTCCAATGGAATATGATGATAAAGAGTTGTGCAGAGCTTATACCTC ATATCCAGATTTAGATATAACTGGTAAGAGTGAAGATTCATATGGCAATCAAAGAAAGGGTGTTATACGTGACTACCCTGTATTACGGAAGCCAAAGTAT TTCGACTATCATGACATGAGAAAAACACCAATGGTATCAACACCCGATGAGGCGTATTTGCATTCTGGATATAGTCATCTTGAAGGTAACAGAATGCCCC AAGATTATGAAATTCCATATCCGCGTGCACCTGAGGCTGACCGAGCATCAAATTTAAGATCACATTATGAATCTAGAAGAGATGGAGCCCCAGGGCTTCG GAATGAAAGGTTTCAAAGTTCATCTTTGTCTAAACATAATTCAGAAACCCACAGGCTAGCTGCCAGAGTGAAGGAGATGAAACTGGATCTTGAAATTCAT GATCATGACCATTCAGGTAGATTTATGAAAAGAAAATACTATGCTAATGAAAATATAAATGTGCATGATTCGAGAGCAGTAAAAGCAAGGAAATGGGATG CAACTGAAGAATTTCAAGATATATATGAAAATGAAGAGTGGGTAGATGAAGATATGAATATATTGTGTTCAACTGCTAATGTTGGATTCAACCATAAGAC ATACCGAAAGTATAAGAGAGAATACAATGAATTGGATAATGAAGAAGATTTTCCATTTGATGAGTGTACATTACCTCAAGATTCTGTGGGACATAGACAA AGGCAGTCATTTCAGTTTCAGAAGTATCCGAATCATAATATAAAGCATCATTCGAAGCCTAGTTCTTCAAGCTGGTATAAGCCCCAGCACTTCTCTAAAG GAAATTTGATTAATAAACATCCTAATGTTTGGAAAAAGCATAATGGTTACCATGACAATAAGCATACATTTAATGATGAATCATCTAAAGAATTGTTAAG TGCCACAGAATCTGAGACAGCTGAGGGTTCTGAGGAGTTTAAACAAATGGTACACAAGGCTTTCTTAATGTACTCTAAGAATATGAATCTGAGCTCTTCT CTCCAAAAAAGCTACCAGGAACAAGGAAAAGCTGGTAGTTTTTATTGCACCGTATGTGGCAAAAGCTCTTCGAAGGATTTCATGGACACTCAACGCCTAG TAACTCACGCTTTCATGTCCCACAAGGCTGGCCTGAGAGCAAAGCACTTGGGTCTTCACAAAGCAATTTGTGTCCTGATGGGTTGGGATACTGTTATTCC TCAAGATACAGTAACTTGGGTTCCCCGGGTCTTGCCTCATGCAGAAGCTTTGGCGCAAAAGGAGGACTTGATTATCTGGACTCCTATTGTTATCATACAC AACATATCGATGCATGATGACAATCCACAGAACTGGAAGGTTGTAAGCATGGATACAGTTGAAGCCTTCATAAGAGGCAAAGGATTTGCAAGAGGAAGAA TCAAACTTACCTTAGGGAAGCCTGCAGATCAAAGTGTTATTTTGGTGAAGTTTCTGGGTACATTTATTGGGCTGGCAGATGCAGAGAGGCTTCATAAATA TCTTTCCGATAATAATCGCGGTAGAGCTGAATATGAAAGAGTAAAATCTGAAGGTATAAAAAGTACTGACATTAAAGACAAAGATGAAGGAGACAAAGTG GAGAATATTCTGTATGGTTATGTGGCAATTGCAGAGGACTTTGATAAACTAGATTTCAGTAGTAAGAACTGGTGCTCAATAAAGAGCAGGAAGGAGATTG AAGACTTGGATAAAGATCCTGTTAAAACTGATGAGAAGTGATAGATAAAAATTATGGTTGAAGACCCTTTCAGGAATTTAATGGTTGAGTTGTTAAAATT TGTGTTCATCTTATCATTACCATTTATTCTCCATCTAGTTAATTGCTATCACCACAACAATCCCATAATTATGTCTACAATTGTATAGTTTGTATTGATC AGTTGAAAAGTTTATTGACCAAATTTGATGGAACAATATTATTTTTTTGTACTATTAAGGATATCTTCACGCCTTTTAGTAAGGAACTAATTTCTTTCAG AACTCGTGGTTGTCTCTCCCTATAAGTTTCACGCCTTTTGGTAAGGAACTAATTTCTTTCAGAACTCGTGGTTGTCTCTCCCTATAAGTGTCACTCCTAC AAATCGAACCTTCGACCTTGGGGATGGAACATTAGTATGACAATGGATAAGTGATGATTGAATATTGAGTGATTTATCTTGTTCCTTGTATTTGTGAGCT TATTTTTTTTAAACTTGTTTATGGTTGTTTGAACTTAAAATGGAGTTTGATCATGTTGATTACTT
• Tissue: pods
• Gene name: LI_gene_153359;
• Additional information: details;

Expression of Ll_transcript_526825

FPKM

• PAB: 1.2
• PNAB: 2.5
• PS1: 4
• PS2: 2.4
• PS3: 3.6
• PW1: 2.8
• PW2: 2.2
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_526825

• Blastp: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 24.88% of identity
• Blastx: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 24.64% of identity
• Eggnog: Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45)
• Kegg: Link to kegg annotations (100134882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428430.1)
• Pfam: XS domain (PF03468.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;