Id Trinity | TRINITY_DN47526_c0_g1_i3 |
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Name Transcript | Ll_transcript_526827 |
Sequence | TCCATTATCAACTACTTCTAAAATTTTCTGCCATATCTAATTTGATAATTGTAATAATAATTTGATGAAAGAATGACTCGGAACACAATTCCAAATTAAG AGAGAGAAAGCTCCATGACTCACACTCTTCTCGTTGTTCCTTGCATCAATCAACATGATTCAACTTCGCGCTTTCTCTCAAAAGCTCTTCGAAGGAGTTC ATGGACACTCAATGCTTAGTAACTCATGCTTTTATGACCCATAAGGCTGGCCTGAGAGCAAAGCACATGGGTCTTCACAAAGCAGTTTGTGTTATGATGG GTTGGGATACTATTATTCCTCAAGATACAGTAACTTGGGTTCCCCGGGTCTTGCCCCATGCAGAAGCTTTGGCTCAAAAGGATGATCTGATTATCTGGAC TCCTACTGTCATCATCCATAACATATCAATGCATGATGACAATCCACAAAACTGGAAGGTTGTAAGCACGGAAACAATTGAAGCTTTCGTAAGAGGCAAA GGTTTTGTAAGGGGAAGAATCAAATTATGCTTAGGCAAGCCTGCAGATCAAAGTGTAATTTTAGTGAAGTTCCTGGGTACATTTGTTGGGCTAGCAGATG CAGAGAGGCTTCATAAATATCTTTCGGATGATAATCGCGGTAGAGCTGAATATGAGAAAGTAAAATCTAAAGGTATAAAAAGCTATGACATTAAAGAGAC AGATCAAATAGACAAAGTGGAGAATATTCTGTATGGTTATGTTGGAATTGCAGAGGACTTTGACAAACTAGACTTCAATAGTAAGAAATGGAGTTCTATA AAGAGCAGGAAGGAGATTGATGACCTGGATAAAGCTCCTGTTAAAACCGACGAAAATCGATAGATAAACAGTATGGTTGAAGACCCTTTCAGGAGTTTAA TGCAACCCTGATGATGATCTGAATTCAGTGTTCTTATTGCATATTTGTTTTTACCATTGTTCATGTTAGTAGTACATGTATAGTTTCAGTGTTATTTAAT GTCTGTGTTATAGTTTCTTAATGTTAAACTATACATTTAACTGAAAACTGATGCAAGTGCTATTGTGTTTATGTGGTGAGCAATTTAGCTTGTAAGCAAT AATAATTAATTATTCTGACTAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_153359; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526827
Blastp | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 23.94% of identity |
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Blastx | - |
Eggnog | Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45) |
Kegg | Link to kegg annotations (100134882) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433195.1) |
Pfam | XS domain (PF03468.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |