Ll_transcript_526830

• Id Trinity: TRINITY_DN47526_c0_g1_i6
• Name Transcript: Ll_transcript_526830
• Sequence: TCCATTATCAACTACTTCTAAAATTTTCTGCCATATCTAATTTGATAATTGTAATAATAATTTGATGAAAGAATGACTCGGAACACAATTCCAAATTAAG AGAGAGAAAGCTCCATGACTCACACTCTTCTCGTTGTTCCTTGCATCAATCAACATGATTCAACTTCGCGCTTTCTCTCAAAAGGTTTGAGATCAGAAAA AGCATACAATTTTATCACTCACTCTCTTAAATTATGTACTTTGATTTGTATCTGCAATTCAGCATTTTTCTAGGGTTAGGGTTTAAGGATTGGTAGGTTT TGTTGGTTTTTTCTAAGATTCCTTTTCGGATTAAAGAAATTCGATCAAAAGGGTATTTAGGGTTTGTGTGCTTGATTAGTCAATTAAGGATGCAATTTAG AAGGCGCGAAGAGGAGCATGTTCCTGTTGCACTGTCTCCGTCTTCGAAGTTGCATGCACAGCACCAGCTCGAAGCTGATCCTGATCCTAACCGGAGGAAT AGCCGTGACGGGTTGGATCCAGTGCAGCATAGAAATTTGAGCCCTCTGAAGGTGGATGGGGTAAGAAGAGGTGGTGGTGCTGTTAGGAACAAAGTGGTCG GTCGTAGTGATAGGTTTGAAAGGAGGGATTTTGATTGGCAATTGGGTGGTCATAGGAGCGGTCATTTCAGGCCACAGTCTCCTGTGGATGAAGAATTGAG AAAAAAGACACATTTTAATAATGGGGTTATGCATAGAAGTTGTTCACCACCACCTATGGGTTTGAGACCAAGACATGAGTTGGCGAATTCAATGGATTAT GAAGTTGATAATGACGAACATTTGGATGTGAAGCATGTTTACAATAATAGAGAGAAGGATTTAATTGAAAACAGGTTAGGTGGTGGAGTGGGCATGGTGG ATCATAAATATGTTATACGTGGAAATGAAGCAGGAGGTTCATATATGTCAAATCCTGATAGCTCAATTCCAGATATGGGTGTAAATGTAACATCAAGGTA TGAAGAAGCTGGTTTGCACCTGCCTCGGCCGTCGAGGACTGTGCCCATGGGAAGATTTGATCACGGAAGATTACAGCACCAAGAATCTCTATCTATGGAT AAGATACCCATCACTGAAACCCACACCAGGGTAGAAAAAGTTATTTATCATGCAACAGATGGCTCGTATGCGACAATATCTCCCTCATACACAAATGATT TTGCAGGAACTTCTCACTTGAGGGAGAGGGATTATGGAGGCTCCTCTGTTGAAATGTCAAGGAGTGATTTTCTATGCTCGCGTGGTGATGGCATCTGTTT ACCTACACCTTACGATCTGTCAAGGAGCAGCAGAAAACTTGCAGAACCTGCAGGGTTTAGTGGACATGAGCAAAGGCCACTTGTAGACACTACTAGAGAT CCTGAAATTAGGCACAGGAATATGATGTGTCACCAACGATGTGAGTTTAGTCCTACCAGGAGCGAGCGTGAGGATTATCTTAATTCCAAATTTCAGGTAA GAGAAGCACAGGATGACCGTGTATATCAGTATGATGATTTACCTAGAAGGATAGCTTCTCATGGTCGACTGAGCTATGAGAAAGTTCCAGTGGAATATGA TAATAAGGAGTTATCCAGCCCTTATATCTCATATCCAGATGTAGATAGAACTGCTACGAGTGGAAACTCTTATGGCAATCAAAGAAAGGGTGTTATATGT GACCACCCTGCATTACAGAAGCCAAAGTATTTGAACTATCAGGATATGAGAAGAACATCAATGGCATCAACACCAGATGAGGCCTATTTGCATTCTGGAT ATAGTCATCTTGAAGGTGGTAAGAGAATGCCACAAGATTATGAAATTTCATATCTGCGTGCACCTGAGGCTGACCGATCATCAAATTTGAGATCACATTA TGAATCTAGAAGAGATGGAGGGCCAAGACTTCAGCAAGAAAGGTTTCAAAGTTCATCTTTCTCTAAACATAATTCAGAAACCTACAGACAAGATGCAAGA ATGCAGGAAACGAAACAGGATATTGGCATTCATGACCATTCAGGTAGGTTTATGAAAAGAAAATACCATGCTAATGAAGATATAGATGTCCTTGATTCTA GAGCAATAAAATCAAGTAAATGGGATGCAACTGAACAATTTCAAGATGTATATGAAAATGAAGAGTGGGTAGATGACGAAGATACGAATATGTTTTATTC AACTCGCGATATTGGATTCAGCCATAAAACATACGGGAAGTATAAGAGGGAATGCAATGAACTGCAGAGTGAAGAAGATTTTCCATCAGATGAGTGGATG TTACCTCAAGATTCTGTGGGACATCTACAAAAACATTCATTTCGGTTTCAGAAGTATCCAAATCATAATATAAAGCATCATTTAAAACCTAGTTCTTCAA GCTGGTATAAGCCCCAACACTTCTCTAAAAGAAATGTGATTCATAAACAACCAAAAGTTTGGAAAAAGCATCACGGTTACCATGAGAATAAGCATACATC TAATGATGAATCATCTGAAGATTGGGTAATTGCCACAGAATCTGAGCCACCTGAGGGTTCTGAGGAGTTTAAACGAATGGTACATGAGGCTTTCTTAATA TACTCCAAGAATTTGAATCTGAGCTCGTCTCTCCAAAAAAGGTATCAGGAACAAGGAAAAGCTGGTAGTTTGTACTGCATCGTATGTGGCAGAAGCTCTT CGAAGGAGTTCATGGACACTCAATGCTTAGTAACTCATGCTTTTATGACCCATAAGGCTGGCCTGAGAGCAAAGCACATGGGTCTTCACAAAGCAGTTTG TGTTATGATGGGTTGGGATACTATTATTCCTCAAGATACAGTAACTTGGGTTCCCCGGGTCTTGCCCCATGCAGAAGCTTTGGCTCAAAAGGATGATCTG ATTATCTGGACTCCTACTGTCATCATCCATAACATATCAATGCATGATGACAATCCACAAAACTGGAAGGTTGTAAGCACGGAAACAATTGAAGCTTTCG TAAGAGGCAAAGGTTTTGTAAGGGGAAGAATCAAATTATGCTTAGGCAAGCCTGCAGATCAAAGTGTAATTTTAGTGAAGTTCCTGGGTACATTTGTTGG GCTAGCAGATGCAGAGAGGCTTCATAAATATCTTTCGGATGATAATCGCGGTAGAGCTGAATATGAGAAAGTAAAATCTAAAGGTATAAAAAGCTATGAC ATTAAAGAGACAGATCAAATAGACAAAGTGGAGAATATTCTGTATGGTTATGTTGGAATTGCAGAGGACTTTGACAAACTAGACTTCAATAGTAAGAAAT GGAGTTCTATAAAGAGCAGGAAGGAGATTGATGACCTGGATAAAGCTCCTGTTAAAACCGACGAAAATCGATAGATAAACAGTATGGTTGAAGACCCTTT CAGGAGTTTAATGCAACCCTGATGATGATCTGAATTCAGTGTTCTTATTGCATATTTGTTTTTACCATTGTTCATGTTAGTAGTACATGTATAGTTTCAG TGTTATTTAATGTCTGTGTTATAGTTTCTTAATGTTAAACTATACATTTAACTGAAAACTGATGCAAGTGCTATTGTGTTTATGTGGTGAGCAATTTAGC TTGTAAGCAATAATAATTAATTATTCTGACTAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_153359;
• Additional information: details;

Expression of Ll_transcript_526830

FPKM

• PAB: 0
• PNAB: 4.2
• PS1: 6.4
• PS2: 2.7
• PS3: 5
• PW1: 4.7
• PW2: 3.2
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_526830

• Blastp: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 23.85% of identity
• Blastx: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 23.61% of identity
• Eggnog: Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45)
• Kegg: Link to kegg annotations (100134882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433195.1)
• Pfam: XS domain (PF03468.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;