| Id Trinity | TRINITY_DN47529_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_526263 |
| Sequence | TTGAGAATTAAATGTTGGTAGTTGAGTCTCATGTAAGGTGAGTTATTAGCAGCTATTAATGTTTCCACTTCCCCCTTCAGACCATAGCATTTAATTATGG ACCACACCTCGTTTTTCTACATTTCACCCCTCACATGTCACATATTGTCACGGATAATAACCCATTTCAATTTTTTCATTAACACCAAATGGCTTCTTCT TCCAAATCTCCACAATTCACTCCAGTAAGTAGTGTATCATTTTTTGTCTAATTTCTTAGGAAAATGTCATGTTTCATGCTCCATATTATATGATGTGCAT GATTTTGTTTATTTTCTTTGTTGTTGTAGATTCAAGAAGAGCATGAATTTGATGAGTATAGTGAAGATAGAAGCCAAAGTAGAGCAACCCCAATAAGTTC TTGCACTGAAAAAAGTGTGACACCAAATCAAAAGCACCCTCCAACCCCTATTGTGAACAAGAATGGTAACAAGTCTAATAATCATAAGAAGAAAAGGTCT GAATCTGATGGTGGTTCTGTTAATGGAGAAGATATTTCAGTGTCTTGCAACAAGTGTAGACCACATGTTCGTGACAAAATCTTTGTCTTTCCCTTTGATC ACAACAACAATGGACAAAGTAACAAGCATTTATCTTTGCTGGCTAGTCCTAATGCTATTTTCAGGTCCATTATGTCCAAGTTAACCCGCAAGAGCCCCAT GTCCACTGAAACTGTTTCAAGAGAAGAACAATGGAAAATGGCAGTGTCTGAGCTTTCTCATAAGCTGGTTCAAGCTACAAGGAAGAGGGATGAAGCAATT CTAGAGGCTTCAAGGCTTATGCAATCAATGGCTGAGTTGGAGAAGAAGCTTAACAAGCTTGAGTTGTATTGTCATAGTTTGAAATCTGGTCTTGAAGAAT GTAGCAATAGTACTACTTCACCTTATCATAAGCTTAAGAATAATTTCCATCAAGACACTGTGATACAGAACTTCTTGGTGTTAGTCTCTGAAGCAAGGTC TTCTGTGAGGCTTCTGAGTCGTTCTATTACCATGCAACTTAGGCACATGGGAGGGAAAGTGTTTGAGAAAGTTTGTTTACTTCTTCAGCCTTATGACATT AGAGTATCTTTCTCTAAGAACCCAAGAAGCTTGATTTTCTACTTAGAGGCCCTTTTGAGTAGAACTTTCTTTGAGGACTTTGAATCAATTGGTTTTCAAA AAAGTGCTTGTTCTCATATACTGAACCCTTTGGAAAGATGTGAGGCTAATTTTACTTCCTTCAATAATCTTCATGGATTGACATGGGAAGATGTGTTGAG CAAAGGGACAAGGCACTTCAGTGAGGACTTCAGTAGGTTTTGTGACAGAAAAATGAGTCAGATTGTGGCAATGTTGGGTTGGAACAGGGCTTGGCCTGAG CCACTATTGCAAGCTTTCTTTGGTGCCTCAAAGAGTGTGTGGATGGTGCACCTTTTGGCCAACTCAGTGCACCCAAGCTTGCCAATTTTTAGAGTGGACA AAGGGGTGAGGTTTGATGAGGTGTACATGGAGGACATGGGTGGGGACAAGTCTTCCAAGTTGATCCCTAACATGGTCAAGATAATGGTTGCTCCAGGTTT TTATGTCCATGGCAGTGCAGTGAAATGTAAGGTCCTTTGCAGGTACTTGAGTAACAACAGCCAAAGTTATATTAACAAAGAAGAAAAAGGTTTAACTCCA TTCCCTTAAGATAGAAACAGTTGAATCAACATCTAATGTTTTTATCATGGTTATAAATTGTGATTACAATTACCTTGAGTTGTTTATAGATCACAATTAA GAATAGTTATTGAAACCGTGAATGTGACTACAATTGTGGTTCTGATGTGATTTAGAAGACTATCATATGTATAATATTGTGACCATAATAGTAGTCTCAT ATCCCACTTTAGAACCTTATTGTTTTTTATGTTAACTAATGTTATGTAAATTATATCATTTTATTGGGGTAGCTGAGTTGGATATGTAGTGTAAAAGGCA ATATATAAAATGTTTGGGAGGTTGGTATATGGAGATTTAGGGTCAAAGTGAAAAAATGGCACTTTATGGTTCCACTTTATCATATTTTGTTTAGTTACAT CTCTTTGGAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153370; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526263
| Blastp | IRK-interacting protein from Arabidopsis with 39.05% of identity |
|---|---|
| Blastx | IRK-interacting protein from Arabidopsis with 37.97% of identity |
| Eggnog | expressed protein(ENOG410Y9VT) |
| Kegg | Link to kegg annotations (AT5G12900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446187.1) |
| Pfam | - |
| Rfam | - |
| GO | - |