| Id Trinity | TRINITY_DN47530_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_526630 |
| Sequence | GTCACATTCTTGCGCTTGCGCCTCCTCCTGAAAAAAACCCCTTTTTGCTCTCAGAAAATCATCTCATGGCTCCAAAGAAGGAAAAGGCTCCCCCACCTTC CTCCAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTTGATCAA GCATCCTATGATAAGCTTCTCACTGAAGCTCCTAAGTTCAAGCTCATCACTCCTTCCATTCTTTCTGATCGTTTGAGGGTACCTATTCTGTCACTGTCTC TTTGTTAATTTGTTTTGTTTTTGAATCATCTTGTCTTATGATTTGTGTGTTAATGTGGGCATGTTGCATTTTTCGTGTTTTCGATTTTTTTGGTATGTCT CATGTAACAAGATTTAGGCGTAGGATTAGTCAAACATCATTCTTGTTTACGTTTGTGTGCTTTTCCAGTGACATTCTTTTTTGTATATTGGTTTGTACTC ATCTTCATTGTTTACGGTTTGATCACCGGTTTGATCGCTGATTTGTCTATTGGTTAGCATGAGTATATTTTATGACATGCTTGACCTGTTTAGTATTCAG TTGCTTAGCATGAGTATATTTTATGATAAGAACAACTGCTATAGTTTAAGAGCTATTCTCTTCTCTAGGAAACATAACTTATCGATTTGAATTCTGATTT CTTATTTTCAATTTTCTATTTTGGATACCACCCTTACACAAGTTTCTGCTATAATATACATATTTTTTATGCATCTTAAATAGTTGATTTTTTTATGATG TATATTTTCATGATTGAAGTATGCATTTACATAAGGCTTCATTCTATTGTTATAATAGGTCATTTATAAAAAAAAGGTTATAGTTGGTGGTTTTTATAAG CTCGACAATCTCTTGTTATCAGTCTAACGATTTCACTAGCAACACTATTATTCTCCCTTTATCTCTGCAATTTGAGTTCGCCTTACCCAATTCATTCAAG AATCACATGATTGGTAATGACTATGAGGAATGATCTATCGAGAATAAAATCATCATTTTGTATTCTCTTCACAGATTAATGGATCACTTGCAAGGAAGGC TATCAGGGACTTGATGGCAAAAGGATCAATCAGATTGGTGTCTGCCCACTCAAGCCAGCAGATTTACACCAGGGCTACAAACACTTAGGTGTAGTATTTT GGACTTAGCCTATGGAGTTTTGGATGGATTAGTGTATTCCTTTCAGTTTGAGATGTTATGCTATATTTTATCCATTCTAGACTGGCTGAACCTGTAGTAG GTCAAGATTCTTTTTTCTATCCTGATAATGTATTTGACTATTTTGTTTCCGTGTGTTATCGATTTTTCAAATTTTGGCAATTTTCATACCGGCTTAATTT GGCTCGTCGAATTGCTAATTTGTTGGATGTTCTATTTCAAAACCACCATAATTGCTCTCCAACTTGTGATTGTTAATTATGATTTGGCCCTTCCCGGTAT AAAGTAGCGACTCTACAGAAATTTCAGGTTTTTGTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153373; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526630
| Blastp | 40S ribosomal protein S25-4 from Arabidopsis with 93.06% of identity |
|---|---|
| Blastx | 40S ribosomal protein S25-4 from Arabidopsis with 91.67% of identity |
| Eggnog | Ribosomal protein S25(COG4901) |
| Kegg | Link to kegg annotations (AT4G39200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448487.1) |
| Pfam | S25 ribosomal protein (PF03297.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |