Id Trinity | TRINITY_DN47535_c3_g1_i6 |
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Name Transcript | Ll_transcript_525693 |
Sequence | CTCAAACACATAGTAATTCTCATGTTAAATTTTTAAATGAAAGGATAATAGAACTTAGGTTCCATAACTCATAGGTCATATAACATACGCACCGTGTTAG TCGAATAGAGTCGCTTTGTTTCTACGCGCCGCACCACCTTCGATCAAGTACCATGTTTCGCAGGATCTTGTCCCATTCTTCATCCTCAGCATGTAGAATC CACAATGCTTCCTTATCTTCCTCAGAAACGCGTTCTCTTACAACAGCGCTATCGGAAACGCGTTCGTACACTCGACGCGCCGCCGCGAATCTCGCCTTGC CGTGCTTCCCACCAACATTAACAGGAGGATTTAGAGAAAACCAATTATCAACTTCCATTGCAAGGTTTATGTCTTCAAACGCATCCAATAAACAAGGAAA AGCCACAGACAAGACCAAAAAGGACATTACAAATGTTGAGGAGGATCCCTTTAATGCTCCTACCTATAATATTCCGGAGAAGCCAGTAACATTTGTGGAG GGGGCATCCTATAGTGTCATCATTCTTGCAGGGCTTGGAGTCGCAGCTGCTGCCGGATATGCTGTTTTCAAGGAGCTTATATTTCAACCCAAGGAGTAAA CACTTATCTTCTTGCTCAATTTATGTTGTCTAAAATGAAAATGCTTGACAGCCAGAACTTTTCTAGTGAATGAGTGATCACTACCACATTGTCATATCCA ACGACCACCCTTGCATCTAGCTGGATTCTGTCTAATTTTTATGTGTGGCTGTGTTGCATTATGCTATAAAAAAGTTCTCATAATTCAGTGTTTTAAGTTT TTCTGTTTCTTTAATATCAGTATGATTGTTATAAGTTGGTAACAGGTACAAGATCTATAACAAGGCTCTCAAAAGAATTCAAGATGATGGCCAGGTGAGT GAACTTTTACTTTCATATCCAACTTAGGTTTTAAAAATTTCAGTCAATGTCCTCATTTTTTTGGTTAGACAAGAAAAAAGTTTATCATACTAAGGATCAC CATTTGTAGGAAGAAGCTATCATAAGAGAATTAGTAAGAGTACCATTTAATCCAATGTTCAATTTTGTTCACAATCTAATGCTCAACGTTCTGTCATTGG AGTCAAAACAATAGATGCTTTAAAGACCTGTAATTTGTAAATATAAAATCTACCTATTGGGTCAGTCATCTAAAATTCATTCAATATATAGCTAAGTAGT TAGTCACACCTCTATGGTGAGTGATACTGGAACCGTATAACGGTTGAAGCGGTCTCTGCCACAATTCCTTCTGTGGTGTTGCGGATCTGAATCATGTTCG TCGCGAGTTTAATAGCACCTTTTGCTGTGAGATTCATCCATGACAAGGACAAGAGCCAAAAACCGCAGGTCTGCAATCGATTCTGTCACAGACTGAAATA AATGGAAGTGTACCAATGTATGCATTGTCTTATGCGGTGCATTTAGACCCTCCTTTGTGTTTTTGATTTTTGTGTGTCTTATAGGCTGTGATTTTACAGC ATACGGGGTTTAGACTTTAGATTTGTTTCCATGCCGTTCATACACTTTGTTTTAGCCGGTGGATTTTGTCCTATATACAGTGGGATTTGTTTCATTTATT TAGAGATGGGCTACCGTTTGTGGTAGGATGGTGTGGGTCCATGTTGCTATTTTGAACCATTTTCTACTCGTTTTCCTTTTTCTTTTCTGGTGTTGAGTTC TCGGGAGTTCGAACTTCCCTGCCTTTTTCTTGTAAACACTCTTTACTTAAAGGCTTAAACTTATCTGACTTATATTAAAATTGAATGTCAATGACAAGAA ATTTTGACTATTACTCAAATACTCATGAATAGGTCTTTTATTTTGTTTACCTTTCTATTTTTAGAATTTATATGTGTGATGTAATTTACTTACATGTTTT CCCTGAATGTGCCAATAGCAGCCACCCTGCTACTTTCTATAGCATTTTTGGGGTTGGCCACTTCGCTCCGCTATTTGGGTCTGACTACTTTATATATAGC TCAAATGCTCATTACTGGCGTCATTGTGAAGTTGGTTGGTTTTGGGTGAAAAACTCATATATGCTACAGTTTACCAAAGTTCTGTGTTCAACCCGGGCTC TTCACTTTAAACAATAAGTTGGCAAACCCCTAGACACTTCAGTGAACAATGACGGGTCATAGAGTGCATGCATATTTTGCAATCATGTTGTAGGGAGTAC CAAATTCTACAATGTATATTTTTTGCACACATGCAATCTCTATATCAAAAGATGATTTGCTTTGCACCAGGTTAGAGTGAGGATTGGATATCCAATTACA GGCTATGGCCAAGAGAGTAGAAATCGTGCTGCTCGCCAAAGAATTCCTAACAGGGTATGGACTGATGAAGATGGCGCTGAGCATGTAGAGGTAATTTTTT TAGCATATAGTCAAATTTATTTGCATATATAATGACATACATACATTTTATGATAAATAATTTCATACTTGACAAAGAAGGGTATTAAGAAAAAGAAAGG AAAGAAAAGAGGGAAAGCATGCCATATTGTTACTATTTTATATTTATTTTTCTGCGATTTTCGATTTTTTAAAGTCTTGTACTATGGTGTATGCTTATTT TTTAGCAGCGAATGTCAGTTGATAATATGATTTACAGGTTAACTTCTATATCCGGGGGCCCCATGGGCACGGAAAAGTTTTTGCTGAGATGTTCAAAGGC CCGGCTGACAATGAATGGAAATTCACATACTTGATTGTGGAGATTAGAGCACCCGCTTCAGCACAATTAATTTTGGAGTCATATGTTCCAGATTACACTC CAAGCAAGTAGCATAGATGAGAAAAAGGGTTTTTATACTTTGGTCCATTTCTGGAGGCTGCATTTTTCATTGATCAGTCTTGTTGACCACCCTTGCCAGT TCATGTTCCTGAAGGGATAAAAATTGAAAGAAGGAAAGACAATTAATGAAAATAGTGAATAAGATGAGAAACTGGATCCTCAAATCTCCCATTCAGCATT TTTTTAATTTAATTTAGAACCTAAGATGGTGAACCTTGACGCAACAATAAAGTTGTTTGTCTTGTGACTTGGAGGTTATAGATTCAACTTTTGGAAACAA CTTTTTCACTTGCGAGTCTCCTGCATCTCATTAGGTGAGAGCTCCTTGCATTAGAATGTATTTTTTTAATTTTTTTAATTTAGAACTTGCATGAGTAAAA GTTTTGGGCAAGAATGATCAGAGAGATTATCTTGTTCTTGAGAGCATTTGAGAATACCTGCCACCTATTTTTGTTATTGTTATTGTTTACAATTCTATAG ATTGGTTTGGGAAGTACATTTACTAGGGAGCATTGAAATTTTTGAAGGGGTGAACAAGTATAAGGTGTAGCTAAAAAGAAAATTGGATATGCTAAAGGGT TAAGCACA BLAST |
Tissue | pods |
Gene name | LI_gene_153403; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525693
Blastp | Probable mitochondrial import inner membrane translocase subunit TIM21 from Arabidopsis with 65.06% of identity |
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Blastx | Probable mitochondrial import inner membrane translocase subunit TIM21 from Arabidopsis with 86.36% of identity |
Eggnog | Import inner membrane translocase, subunit(ENOG4111I5D) |
Kegg | Link to kegg annotations (AT4G00026) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453271.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |