| Id Trinity | TRINITY_DN47540_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_527227 |
| Sequence | TCTCCTTATTCTACCTTCCAATCACACCTCAACTCTGCGTTGCGTTTCATTCTTCTAAGTATTGATTCATCGTCATCTTCTTATTCTACCTTCCAATCAC CCGCACTCGTTACAATTATTTATTGATGTTTCATTTGATTGGCCACTGTTGTTATTGTATTCCTTCATTCCATTCCATTCCATTCCTAAACTACTCCTTT CGCTTTCCAATTTCCTTTTCTGTCCATAGTGAAACCCGTTTTGGTTTATCACTCAAAGATCACGAATGTGATCGAAATAGTATGTACTAAGGATTAAAGT GTCCAAATTTTTTTGACCAACATTTCGAATCTTCAACATTGTTATTTGGTACACACACAAAACTTTAAGGACCCAAATGAGTCTTCAATCCTTTTCTCTG TTTCTATGTTTCACTCACTCAGTTCGAATCTTCAGCATCTACCTTCATGATTTTCCCTATTTCAAAGTTATTTGTGGTCCCGAGATCAAGCCCTACGTAT GTAGCTGCATTAAATATTGAAGAGAGGGATCTGCTGCCCCTAGTGGTACTACTCGACTCGAGTAGGATTGTCTCCCGTGAAGAATACTTGTGGTCCCAAA CCAAAAATATGGATTACGGATAGTTCAGATTGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACACAAAAATTAAAAGAATGA GGATCACCACAGGCGAGCCATCTAGCCATCGTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAACTCACAGGATCTTTATAG ATTATTGAAGGATGCTGAAAATTTTACTATTCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTGTGAAACATCTTCCAGTG CACCTTACTGCAGTGTTAATGAGATCTGGTAGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTCCTTGTGCAATGTAGCCC CCCGACTTCCTAAATTTGATCAGATTTTTCTGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTTGTTGTTCTTAGTGGCTA CAGACAGGAAGACAATGCTTTTAGTCATATGTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGTTTATTTCGCCACAATGG CGAGAAACTGTCCCTGTATTGCTTGCGCATCCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGTTAGGTGTCTTGAGATTA CACTAGCAGCTTGCTACATAGATTTTTCCATGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGTGAGGCTTCATTGCAGTT TCTTCAGTCATTATGCCAACAAAGCTTGTTTAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTTTTCTGGCTCAATCCATC TTGAAGCTTGACAGTCAACATTCTTTCCCGACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCTGCTCAGTTTGTGTGAAG CAGAAAGCCTTTCTTTTCTTGATGAAGTTGCCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTTGACTTGTTGAAGACTGC TTTTGGAAGAGGTCCAGGGCATCTCACTGCTGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAGCTGTCATCCTCTCCGAT GATTCAAACTTCAAATCTTACCTCATAGATTGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTTATCTTGTTGGTGTTCAT CTAATCTCCTAGAAATAGAGGAAGATGCAACTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCATCACTCGATCAACAGAA CGCAACAATTTTGGAACTGAGCCTAATCCCTAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCAAGGTCATTGCAAATCTT TATTGTTTTCTTCCAGACATCTGTAAAGAACAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCTATCTAACTTGCTTCCTG GGTTTTCCTTTCCTTCTGGTGCTCCTAAAGCTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTTGTCCCAAACTTTTTAAA TCCGGAAGATGTACAACTTCTAAGGGTATTTTCTGGTGAACTACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTGTCCAAGTAATTTTTTAT CTTTCTGAGCTGCTAACATAGTTTGTTTCTGACCTGTTCTCTTATATTTTCATAAATCTTTTTCCTTCTACTGTGTTGGAGAAACTTTGGATAACAAAAT TGAGGAGTCATTATCTCGGGATAAGTTTTCTAAACTCAATGTAAATAAGCAATATCAGGTTGTAAGAGGTTCTTTTAAACTACAAATGCCTTTAGTTGTT ACACAGTGTAGCTATGTGTTTTCAACAGTAGTTATGACTTGTGATATTACTGTGCCAATCAAACTGTAAAACCGAGTAAATCCTTATTTTGTCCTCTGGA GATACAAACGTCTTCACATTAGTCCTATAAAAAATTGTCATCAATGCCGTTCCTTAATTAAATTGTTCCTTCTTTGTTATTGAGAAGTGAGTCTAATGGA GCCCCAATTTATGTACTAATTTATTGGCGTTTTGCATGATTGAGGGGCTAAATTGATTTCCAAAGAATTTGGAGGACCAAAGTGGTGACACTTTTGATTA TTGAGGGACTAATAGATGACAAATTCTTTCAACAACCAAATTGATTAATAATTATACTTATATCTTTGGCGGACAAAAAGAAGGGTTTACTCAAACTAAT TTTACTTTAGTATTAGGCAATGCTTTTAATTGTTTAATAACGGCGTAAGCAACTCTCAAATTGGGGTTTCTGATTATCATCTAGTTTATCTTCAACACAA TGAACAGTAAAGTTTGATTTCCTGTAGGATGCTCAGATTACAAGGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGA GTGGTAACATGAAGGGTGGAATGTTTGAGACTTCAGCTTTTCCAGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAA TAGGAAAGAGCGCGTAGAAGGTAAAGGTATATCTGGAAAAATTGTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCT TCAGATACTATAAAGATATTTGGAGAAAGTCCAGAGGATGAAAAGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGG TGACTCTGATTGAGAGGGCTATCTTGGACGAGCCGGATATGCAGCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGA AGTTACATCTTCTCAGCTTAAAAATTGGTTGAACAATCGAAAAGCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGA GGGCTGATTCTAGGGTCCCATGACTCTCCTGATAGTATCCGTCATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATC CTGACCCTGCCAGGGCCAAATCTGTGGATGCCGGTCATCCAAAAGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGA TATTGGCAAAGGGAAGATAGTTCAAATGCATGGTACATGGCATGGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTT GATAAAGGACTTCAGCTACCCTTCCCATCAGAAGACACTGGCACCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTC ACAATATTCATGTGTTGCAGTCTGAATGAGTTCAATGATACTTCTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAG CTTATGATATTAACATAAGTTTACAGCAGCAATAATAATTAGTAGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTC TGCTGAGCAAGGTAGGACTTGCTGAGATTTGAAATTATATGGTTTCCATATGTTGAACTTGTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_153428; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527227
| Blastp | Nodulin homeobox from Arabidopsis with 46.1% of identity |
|---|---|
| Blastx | Nodulin homeobox from Arabidopsis with 44.95% of identity |
| Eggnog | HOX(ENOG410XTJ0) |
| Kegg | Link to kegg annotations (AT4G03090) |
| CantataDB | Link to cantataDB annotations (CNT0002267) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413509.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |