Id Trinity | TRINITY_DN47540_c0_g1_i12 |
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Name Transcript | Ll_transcript_527230 |
Sequence | TGACACTTGGACTGTGATAGGAACACGTCAATTTGTCTTTTCTTAAAATTTATTTGAAAAATATGAAGAATAAACTTGCTATTATTCACGTATTTGTGCG TTTCAAACACCGAAGAGACTAAACCCATGTTTTGTCACATACTCCTATTCTCCTAATAATACAGGGGTGAGACTTCTCTAATGTGAGTTTGCCTATAAAA TGAGTAAATAAGGGTATATCCACCCTTGCTCTGATAAAGTGCATAGCGATTTCAACTCACTGAATAATCTAAGATATGCCCTTACTTTAAAGGCAAATAC ACTTTAGAGGAGCCTTTTTCATAATATAGGTAGTTGATTTTAAGCGTAGCCTGAAATTCTAACCTACTAGAATGTTCCGTTGATTATGAGTCAGCAGGGG GCAAATAGTAAAGATATACGGTTCTAAAAGACTCAATAAGACCTTCACATCAGTTATGCTCCATTGGACTAACCCGTCTATCTCTACCAACCACCCCCTC TCCCCTCCCGTGTGTTAGTTGGCTGCAAAATTACGCAGGCAGATATCGTGAGAAACAAAGTAGCTAGCCTGTGGCATCCAGGATTACGGATAGTTCAGAT TGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACACAAAAATTAAAAGAATGAGGATCACCACAGGCGAGCCATCTAGCCATC GTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAACTCACAGGATCTTTATAGATTATTGAAGGATGCTGAAAATTTTACTAT TCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTGTGAAACATCTTCCAGTGCACCTTACTGCAGTGTTAATGAGATCTGGT AGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTCCTTGTGCAATGTAGCCCCCCGACTTCCTAAATTTGATCAGATTTTTC TGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTTGTTGTTCTTAGTGGCTACAGACAGGAAGACAATGCTTTTAGTCATAT GTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGTTTATTTCGCCACAATGGCGAGAAACTGTCCCTGTATTGCTTGCGCAT CCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGTTAGGTGTCTTGAGATTACACTAGCAGCTTGCTACATAGATTTTTCCA TGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGTGAGGCTTCATTGCAGTTTCTTCAGTCATTATGCCAACAAAGCTTGTT TAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTTTTCTGGCTCAATCCATCTTGAAGCTTGACAGTCAACATTCTTTCCCG ACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCTGCTCAGTTTGTGTGAAGCAGAAAGCCTTTCTTTTCTTGATGAAGTTG CCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTTGACTTGTTGAAGACTGCTTTTGGAAGAGGTCCAGGGCATCTCACTGC TGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAGCTGTCATCCTCTCCGATGATTCAAACTTCAAATCTTACCTCATAGAT TGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTTATCTTGTTGGTGTTCATCTAATCTCCTAGAAATAGAGGAAGATGCAA CTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCATCACTCGATCAACAGAACGCAACAATTTTGGAACTGAGCCTAATCCC TAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCAAGGTCATTGCAAATCTTTATTGTTTTCTTCCAGACATCTGTAAAGAA CAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCTATCTAACTTGCTTCCTGGGTTTTCCTTTCCTTCTGGTGCTCCTAAAG CTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTTGTCCCAAACTTTTTAAATCCGGAAGATGTACAACTTCTAAGGTCACT TGTCCAACTCTTAATCCCTTTGTAGTGTTGACTGTTGCCCAATTGATTTTGAACAGTTGTTTTGATGGCTAATCATCTATCAGACATGTATGGGTGTGTG TGGGTGTATGTATATATATGATGGTTTGTGTGTGATCATCATGCCACTGATAAATCTCCTTACGCTAGCTGATTGATGAAGATGGTCATAATTTGTATTA TAAATGACTTTGCCAGATGTTTAGAAAAGGTTTCAAGCATGGTCTGCAAAAAGTTGCATACTTATGAATTAGTTATTAATGATTAAATGCTGTTTGGTAT AAAGAGGGAGAGCTTGTTGTAGACACCATATGGTGTCAGGGAACCTTCAGGCTCATTGCATACTATGATGTCTTGACTCTTAAGGACAGATTAGCAACAG TAATACAACTTTTTTATCCACAAAATGAGAAGAAAAACCCGAAGGGGGTTGACATTTTCTTTTGTGGCTTCATGATGCCAACGTTATGAATGTCAATTCA CCTTTTCTTTTCCTGTACATTATACCAATTATTTTGTAAAAATTTTGAATAACTATGTAACTAAACTAAATCTTCCGACTTGCCTGAATAATGTGTATTG TAAATTCAATTTTGCTATTATATTGTATTTTATCTGTCTTCTGATCATTTGTACATTCAACTTAAGTTGCAAATCATTTGCAGGGTATTTTCTGGTGAAC TACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTGTCCAAGTAATTTTTTATCTTTCTGAGCTGCTAACATAGTTTGTTTCTGACCTGTTCTC TTATATTTTCATAAATCTTTTTCCTTCTACTGTGTTGGAGAAACTTTGGATAACAAAATTGAGGAGTCATTATCTCGGGATAAGTTTTCTAAACTCAATG TAAATAAGCAATATCAGGTTGTAAGAGGTTCTTTTAAACTACAAATGCCTTTAGTTGTTACACAGTGTAGCTATGTGTTTTCAACAGTAGTTATGACTTG TGATATTACTGTGCCAATCAAACTGTAAAACCGAGTAAATCCTTATTTTGTCCTCTGGAGATACAAACGTCTTCACATTAGTCCTATAAAAAATTGTCAT CAATGCCGTTCCTTAATTAAATTGTTCCTTCTTTGTTATTGAGAAGTGAGTCTAATGGAGCCCCAATTTATGTACTAATTTATTGGCGTTTTGCATGATT GAGGGGCTAAATTGATTTCCAAAGAATTTGGAGGACCAAAGTGGTGACACTTTTGATTATTGAGGGACTAATAGATGACAAATTCTTTCAACAACCAAAT TGATTAATAATTATACTTATATCTTTGGCGGACAAAAAGAAGGGTTTACTCAAACTAATTTTACTTTAGTATTAGGCAATGCTTTTAATTGTTTAATAAC GGCGTAAGCAACTCTCAAATTGGGGTTTCTGATTATCATCTAGTTTATCTTCAACACAATGAACAGTAAAGTTTGATTTCCTGTAGGATGCTCAGATTAC AAGGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGAGTGGTAACATGAAGGGTGGAATGTTTGAGACTTCAGCTTTT CCAGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAATAGGAAAGAGCGCGTAGAAGGTAAAGGTATATCTGGAAAAA TTGTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCTTCAGATACTATAAAGATATTTGGAGAAAGTCCAGAGGATGA AAAGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGGTGACTCTGATTGAGAGGGCTATCTTGGACGAGCCGGATATG CAGCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGAAGTTACATCTTCTCAGCTTAAAAATTGGTTGAACAATCGAA AAGCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGAGGGCTGATTCTAGGGTCCCATGACTCTCCTGATAGTATCCG TCATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATCCTGACCCTGCCAGGGCCAAATCTGTGGATGCCGGTCATCCA AAAGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGATATTGGCAAAGGGAAGATAGTTCAAATGCATGGTACATGGC ATGGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTTGATAAAGGACTTCAGCTACCCTTCCCATCAGAAGACACTGG CACCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTCACAATATTCATGTGTTGCAGTCTGAATGAGTTCAATGATAC TTCTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAGCTTATGATATTAACATAAGTTTACAGCAGCAATAATAATTA GTAGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTCTGCTGAGCAAGGTAGGACTTGCTGAGATTTGAAATTATATG GTTTCCATATGTTGAACTTGTTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_153428; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527230
Blastp | Nodulin homeobox from Arabidopsis with 45.54% of identity |
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Blastx | Nodulin homeobox from Arabidopsis with 45.75% of identity |
Eggnog | HOX(ENOG410XTJ0) |
Kegg | Link to kegg annotations (AT4G03090) |
CantataDB | Link to cantataDB annotations (CNT0002267) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413509.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |