| Id Trinity | TRINITY_DN47540_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_527232 |
| Sequence | TAACAACTTAATTTGCAAAATTTGGCTCGTTGTTAATTGAGCTAACCTTGAGTTTTCACGTGTCCAAATGATTCACGAGCTCATAAGTCAACTTGATATA ATAATGGTGACAATGATGCTTTATTTGAATATAAATTAGCATTTAGCTTTAATTTTGGTTTGACTAAATTATGTTTTACGGTTTTATTGAGCTATAATCA AGTGATACAAACCTCAGTATCAACTGCTTGAGCTTGTGCAAGTCATGAACTTCTGGTGGGGTGAGCTCGAGCCCAAAGAATGAGCTTGAGCAAGGCCTGG CTTAGCTTAGTTTGGCTTCTAACACTGCATTGTTACTGTGTTCATGGTAAATTATTGTGCATGATGCAGGTAGAGGCATCGGTATGACATTTTTGTAGTG TGCAGCATGATGGGATTGGACTTAGTTGGGATGGAATCTGTGTTTGGATGATGCATGAGAGCATTTACTAGAGTACCTATGTATTTATAGAAAATTGTAT TTGGATGTTTCAGTGGAGGATTACGGATAGTTCAGATTGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACACAAAAATTAAA AGAATGAGGATCACCACAGGCGAGCCATCTAGCCATCGTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAACTCACAGGATC TTTATAGATTATTGAAGGATGCTGAAAATTTTACTATTCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTGTGAAACATCT TCCAGTGCACCTTACTGCAGTGTTAATGAGATCTGGTAGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTCCTTGTGCAAT GTAGCCCCCCGACTTCCTAAATTTGATCAGATTTTTCTGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTTGTTGTTCTTA GTGGCTACAGACAGGAAGACAATGCTTTTAGTCATATGTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGTTTATTTCGCC ACAATGGCGAGAAACTGTCCCTGTATTGCTTGCGCATCCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGTTAGGTGTCTT GAGATTACACTAGCAGCTTGCTACATAGATTTTTCCATGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGTGAGGCTTCAT TGCAGTTTCTTCAGTCATTATGCCAACAAAGCTTGTTTAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTTTTCTGGCTCA ATCCATCTTGAAGCTTGACAGTCAACATTCTTTCCCGACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCTGCTCAGTTTG TGTGAAGCAGAAAGCCTTTCTTTTCTTGATGAAGTTGCCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTTGACTTGTTGA AGACTGCTTTTGGAAGAGGTCCAGGGCATCTCACTGCTGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAGCTGTCATCCT CTCCGATGATTCAAACTTCAAATCTTACCTCATAGATTGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTTATCTTGTTGG TGTTCATCTAATCTCCTAGAAATAGAGGAAGATGCAACTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCATCACTCGATC AACAGAACGCAACAATTTTGGAACTGAGCCTAATCCCTAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCAAGGTCATTGC AAATCTTTATTGTTTTCTTCCAGACATCTGTAAAGAACAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCTATCTAACTTG CTTCCTGGGTTTTCCTTTCCTTCTGGTGCTCCTAAAGCTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTTGTCCCAAACT TTTTAAATCCGGAAGATGTACAACTTCTAAGGTCACTTGTCCAACTCTTAATCCCTTTGTAGTGTTGACTGTTGCCCAATTGATTTTGAACAGTTGTTTT GATGGCTAATCATCTATCAGACATGTATGGGTGTGTGTGGGTGTATGTATATATATGATGGTTTGTGTGTGATCATCATGCCACTGATAAATCTCCTTAC GCTAGCTGATTGATGAAGATGGTCATAATTTGTATTATAAATGACTTTGCCAGATGTTTAGAAAAGGTTTCAAGCATGGTCTGCAAAAAGTTGCATACTT ATGAATTAGTTATTAATGATTAAATGCTGTTTGGTATAAAGAGGGAGAGCTTGTTGTAGACACCATATGGTGTCAGGGAACCTTCAGGCTCATTGCATAC TATGATGTCTTGACTCTTAAGGACAGATTAGCAACAGTAATACAACTTTTTTATCCACAAAATGAGAAGAAAAACCCGAAGGGGGTTGACATTTTCTTTT GTGGCTTCATGATGCCAACGTTATGAATGTCAATTCACCTTTTCTTTTCCTGTACATTATACCAATTATTTTGTAAAAATTTTGAATAACTATGTAACTA AACTAAATCTTCCGACTTGCCTGAATAATGTGTATTGTAAATTCAATTTTGCTATTATATTGTATTTTATCTGTCTTCTGATCATTTGTACATTCAACTT AAGTTGCAAATCATTTGCAGGGTATTTTCTGGTGAACTACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTGTCCAAGATGCTCAGATTACAA GGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGAGTGGTAACATGAAGGGTGGAATGTTTGAGACTTCAGCTTTTCC AGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAATAGGAAAGAGCGCGTAGAAGGTAAAGGTATATCTGGAAAAATT GTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCTTCAGATACTATAAAGATATTTGGAGAAAGTCCAGAGGATGAAA AGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGGTGACTCTGATTGAGAGGGCTATCTTGGACGAGCCGGATATGCA GCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGAAGTTACATCTTCTCAGCTTAAAAATTGGTTGAACAATCGAAAA GCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGAGGGCTGATTCTAGGGTCCCATGACTCTCCTGATAGTATCCGTC ATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATCCTGACCCTGCCAGGGCCAAATCTGTGGATGCCGGTCATCCAAA AGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGATATTGGCAAAGGGAAGATAGTTCAAATGCATGGTACATGGCAT GGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTTGATAAAGGACTTCAGCTACCCTTCCCATCAGAAGACACTGGCA CCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTCACAATATTCATGTGTTGCAGTCTGAATGAGTTCAATGATACTT CTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAGCTTATGATATTAACATAAGTTTACAGCAGCAATAATAATTAGT AGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTCTGCTGAGCAAGGTAGGACTTGCTGAGATTTGAAATTATATGGT TTCCATATGTTGAACTTGTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_153428; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527232
| Blastp | Nodulin homeobox from Arabidopsis with 45.54% of identity |
|---|---|
| Blastx | Nodulin homeobox from Arabidopsis with 45.75% of identity |
| Eggnog | HOX(ENOG410XTJ0) |
| Kegg | Link to kegg annotations (AT4G03090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413509.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |