| Id Trinity | TRINITY_DN47540_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_527208 |
| Sequence | TGACACTTGGACTGTGATAGGAACACGTCAATTTGTCTTTTCTTAAAATTTATTTGAAAAATATGAAGAATAAACTTGCTATTATTCACGTATTTGTGCG TTTCAAACACCGAAGAGACTAAACCCATGTTTTGTCACATACTCCTATTCTCCTAATAATACAGGGGTGAGACTTCTCTAATGTGAGTTTGCCTATAAAA TGAGTAAATAAGGGTATATCCACCCTTGCTCTGATAAAGTGCATAGCGATTTCAACTCACTGAATAATCTAAGATATGCCCTTACTTTAAAGGCAAATAC ACTTTAGAGGAGCCTTTTTCATAATATAGGTAGTTGATTTTAAGCGTAGCCTGAAATTCTAACCTACTAGAATGTTCCGTTGATTATGAGTCAGCAGGGG GCAAATAGTAAAGATATACGGTTCTAAAAGACTCAATAAGACCTTCACATCAGTTATGCTCCATTGGACTAACCCGTCTATCTCTACCAACCACCCCCTC TCCCCTCCCGTGTGTTAGTTGGCTGCAAAATTACGCAGGCAGATATCGTGAGAAACAAAGTAGCTAGCCTGTGGCATCCAGGATTACGGATAGTTCAGAT TGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACACAAAAATTAAAAGAATGAGGATCACCACAGGCGAGCCATCTAGCCATC GTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAACTCACAGGATCTTTATAGATTATTGAAGGATGCTGAAAATTTTACTAT TCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTGTGAAACATCTTCCAGTGCACCTTACTGCAGTGTTAATGAGATCTGGT AGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTCCTTGTGCAATGTAGCCCCCCGACTTCCTAAATTTGATCAGATTTTTC TGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTTGTTGTTCTTAGTGGCTACAGACAGGAAGACAATGCTTTTAGTCATAT GTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGTTTATTTCGCCACAATGGCGAGAAACTGTCCCTGTATTGCTTGCGCAT CCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGTTAGGTGTCTTGAGATTACACTAGCAGCTTGCTACATAGATTTTTCCA TGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGTGAGGCTTCATTGCAGTTTCTTCAGTCATTATGCCAACAAAGCTTGTT TAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTTTTCTGGCTCAATCCATCTTGAAGCTTGACAGTCAACATTCTTTCCCG ACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCTGCTCAGTTTGTGTGAAGCAGAAAGCCTTTCTTTTCTTGATGAAGTTG CCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTTGACTTGTTGAAGACTGCTTTTGGAAGAGGTCCAGGGCATCTCACTGC TGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAGCTGTCATCCTCTCCGATGATTCAAACTTCAAATCTTACCTCATAGAT TGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTTATCTTGTTGGTGTTCATCTAATCTCCTAGAAATAGAGGAAGATGCAA CTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCATCACTCGATCAACAGAACGCAACAATTTTGGAACTGAGCCTAATCCC TAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCAAGGTCATTGCAAATCTTTATTGTTTTCTTCCAGACATCTGTAAAGAA CAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCTATCTAACTTGCTTCCTGGGTTTTCCTTTCCTTCTGGTGCTCCTAAAG CTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTTGTCCCAAACTTTTTAAATCCGGAAGATGTACAACTTCTAAGGGTATT TTCTGGTGAACTACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTGTCCAAGTAATTTTTTATCTTTCTGAGCTGCTAACATAGTTTGTTTCT GACCTGTTCTCTTATATTTTCATAAATCTTTTTCCTTCTACTGTGTTGGAGAAACTTTGGATAACAAAATTGAGGAGTCATTATCTCGGGATAAGTTTTC TAAACTCAATGTAAATAAGCAATATCAGGTTGTAAGAGGTTCTTTTAAACTACAAATGCCTTTAGTTGTTACACAGTGTAGCTATGTGTTTTCAACAGTA GTTATGACTTGTGATATTACTGTGCCAATCAAACTGTAAAACCGAGTAAATCCTTATTTTGTCCTCTGGAGATACAAACGTCTTCACATTAGTCCTATAA AAAATTGTCATCAATGCCGTTCCTTAATTAAATTGTTCCTTCTTTGTTATTGAGAAGTGAGTCTAATGGAGCCCCAATTTATGTACTAATTTATTGGCGT TTTGCATGATTGAGGGGCTAAATTGATTTCCAAAGAATTTGGAGGACCAAAGTGGTGACACTTTTGATTATTGAGGGACTAATAGATGACAAATTCTTTC AACAACCAAATTGATTAATAATTATACTTATATCTTTGGCGGACAAAAAGAAGGGTTTACTCAAACTAATTTTACTTTAGTATTAGGCAATGCTTTTAAT TGTTTAATAACGGCGTAAGCAACTCTCAAATTGGGGTTTCTGATTATCATCTAGTTTATCTTCAACACAATGAACAGTAAAGTTTGATTTCCTGTAGGAT GCTCAGATTACAAGGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGAGTGGTAACATGAAGGGTGGAATGTTTGAGA CTTCAGCTTTTCCAGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAATAGGAAAGAGCGCGTAGAAGGTAAAGGTAT ATCTGGAAAAATTGTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCTTCAGATACTATAAAGATATTTGGAGAAAGT CCAGAGGATGAAAAGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGGTGACTCTGATTGAGAGGGCTATCTTGGACG AGCCGGATATGCAGCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGAAGTTACATCTTCTCAGCTTAAAAATTGGTT GAACAATCGAAAAGCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGAGGGCTGATTCTAGGGTCCCATGACTCTCCT GATAGTATCCGTCATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATCCTGACCCTGCCAGGGCCAAATCTGTGGATG CCGGTCATCCAAAAGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGATATTGGCAAAGGGAAGATAGTTCAAATGCA TGGTACATGGCATGGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTTGATAAAGGACTTCAGCTACCCTTCCCATCA GAAGACACTGGCACCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTCACAATATTCATGTGTTGCAGTCTGAATGAG TTCAATGATACTTCTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAGCTTATGATATTAACATAAGTTTACAGCAGC AATAATAATTAGTAGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTCTGCTGAGCAAGGTAGGACTTGCTGAGATTT GAAATTATATGGTTTCCATATGTTGAACTTGTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_153428; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527208
| Blastp | Nodulin homeobox from Arabidopsis with 46.1% of identity |
|---|---|
| Blastx | Nodulin homeobox from Arabidopsis with 44.95% of identity |
| Eggnog | HOX(ENOG410XTJ0) |
| Kegg | Link to kegg annotations (AT4G03090) |
| CantataDB | Link to cantataDB annotations (CNT0002267) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413509.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |