Id Trinity | TRINITY_DN47540_c0_g1_i8 |
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Name Transcript | Ll_transcript_527218 |
Sequence | TCTCCTTATTCTACCTTCCAATCACACCTCAACTCTGCGTTGCGTTTCATTCTTCTAAGTATTGATTCATCGTCATCTTCTTATTCTACCTTCCAATCAC CCGCACTCGTTACAATTATTTATTGATGTTTCATTTGATTGGCCACTGTTGTTATTGTATTCCTTCATTCCATTCCATTCCATTCCTAAACTACTCCTTT CGCTTTCCAATTTCCTTTTCTGTCCATAGTGAAACCCGTTTTGGTTTATCACTCAAAGATCACGAATGTGATCGAAATAGTATGTACTAAGGATTAAAGT GTCCAAATTTTTTTGACCAACATTTCGAATCTTCAACATTGTTATTTGGTACACACACAAAACTTTAAGGACCCAAATGAGTCTTCAATCCTTTTCTCTG TTTCTATGTTTCACTCACTCAGTTCGAATCTTCAGCATCTACCTTCATGATTTTCCCTATTTCAAAGTTATTTGTGGTCCCGAGATCAAGCCCTACGTAT GTAGCTGCATTAAATATTGAAGAGAGGGATCTGCTGCCCCTAGTGGTACTACTCGACTCGAGTAGGATTGTCTCCCGTGAAGAATACTTGTGGTCCCAAA CCAAAAATATGGATTACGGATAGTTCAGATTGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACACAAAAATTAAAAGAATGA GGATCACCACAGGCGAGCCATCTAGCCATCGTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAACTCACAGGATCTTTATAG ATTATTGAAGGATGCTGAAAATTTTACTATTCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTGTGAAACATCTTCCAGTG CACCTTACTGCAGTGTTAATGAGATCTGGTAGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTCCTTGTGCAATGTAGCCC CCCGACTTCCTAAATTTGATCAGATTTTTCTGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTTGTTGTTCTTAGTGGCTA CAGACAGGAAGACAATGCTTTTAGTCATATGTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGTTTATTTCGCCACAATGG CGAGAAACTGTCCCTGTATTGCTTGCGCATCCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGTTAGGTGTCTTGAGATTA CACTAGCAGCTTGCTACATAGATTTTTCCATGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGTGAGGCTTCATTGCAGTT TCTTCAGTCATTATGCCAACAAAGCTTGTTTAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTTTTCTGGCTCAATCCATC TTGAAGCTTGACAGTCAACATTCTTTCCCGACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCTGCTCAGTTTGTGTGAAG CAGAAAGCCTTTCTTTTCTTGATGAAGTTGCCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTTGACTTGTTGAAGACTGC TTTTGGAAGAGGTCCAGGGCATCTCACTGCTGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAGCTGTCATCCTCTCCGAT GATTCAAACTTCAAATCTTACCTCATAGATTGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTTATCTTGTTGGTGTTCAT CTAATCTCCTAGAAATAGAGGAAGATGCAACTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCATCACTCGATCAACAGAA CGCAACAATTTTGGAACTGAGCCTAATCCCTAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCAAGGTCATTGCAAATCTT TATTGTTTTCTTCCAGACATCTGTAAAGAACAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCTATCTAACTTGCTTCCTG GGTTTTCCTTTCCTTCTGGTGCTCCTAAAGCTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTTGTCCCAAACTTTTTAAA TCCGGAAGATGTACAACTTCTAAGGTCACTTGTCCAACTCTTAATCCCTTTGTAGTGTTGACTGTTGCCCAATTGATTTTGAACAGTTGTTTTGATGGCT AATCATCTATCAGACATGTATGGGTGTGTGTGGGTGTATGTATATATATGATGGTTTGTGTGTGATCATCATGCCACTGATAAATCTCCTTACGCTAGCT GATTGATGAAGATGGTCATAATTTGTATTATAAATGACTTTGCCAGATGTTTAGAAAAGGTTTCAAGCATGGTCTGCAAAAAGTTGCATACTTATGAATT AGTTATTAATGATTAAATGCTGTTTGGTATAAAGAGGGAGAGCTTGTTGTAGACACCATATGGTGTCAGGGAACCTTCAGGCTCATTGCATACTATGATG TCTTGACTCTTAAGGACAGATTAGCAACAGTAATACAACTTTTTTATCCACAAAATGAGAAGAAAAACCCGAAGGGGGTTGACATTTTCTTTTGTGGCTT CATGATGCCAACGTTATGAATGTCAATTCACCTTTTCTTTTCCTGTACATTATACCAATTATTTTGTAAAAATTTTGAATAACTATGTAACTAAACTAAA TCTTCCGACTTGCCTGAATAATGTGTATTGTAAATTCAATTTTGCTATTATATTGTATTTTATCTGTCTTCTGATCATTTGTACATTCAACTTAAGTTGC AAATCATTTGCAGGGTATTTTCTGGTGAACTACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTGTCCAAGTAATTTTTTATCTTTCTGAGCT GCTAACATAGTTTGTTTCTGACCTGTTCTCTTATATTTTCATAAATCTTTTTCCTTCTACTGTGTTGGAGAAACTTTGGATAACAAAATTGAGGAGTCAT TATCTCGGGATAAGTTTTCTAAACTCAATGTAAATAAGCAATATCAGGTTGTAAGAGGTTCTTTTAAACTACAAATGCCTTTAGTTGTTACACAGTGTAG CTATGTGTTTTCAACAGTAGTTATGACTTGTGATATTACTGTGCCAATCAAACTGTAAAACCGAGTAAATCCTTATTTTGTCCTCTGGAGATACAAACGT CTTCACATTAGTCCTATAAAAAATTGTCATCAATGCCGTTCCTTAATTAAATTGTTCCTTCTTTGTTATTGAGAAGTGAGTCTAATGGAGCCCCAATTTA TGTACTAATTTATTGGCGTTTTGCATGATTGAGGGGCTAAATTGATTTCCAAAGAATTTGGAGGACCAAAGTGGTGACACTTTTGATTATTGAGGGACTA ATAGATGACAAATTCTTTCAACAACCAAATTGATTAATAATTATACTTATATCTTTGGCGGACAAAAAGAAGGGTTTACTCAAACTAATTTTACTTTAGT ATTAGGCAATGCTTTTAATTGTTTAATAACGGCGTAAGCAACTCTCAAATTGGGGTTTCTGATTATCATCTAGTTTATCTTCAACACAATGAACAGTAAA GTTTGATTTCCTGTAGGATGCTCAGATTACAAGGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGAGTGGTAACATG AAGGGTGGAATGTTTGAGACTTCAGCTTTTCCAGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAATAGGAAAGAGC GCGTAGAAGGTAAAGGTATATCTGGAAAAATTGTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCTTCAGATACTAT AAAGATATTTGGAGAAAGTCCAGAGGATGAAAAGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGGTGACTCTGATT GAGAGGGCTATCTTGGACGAGCCGGATATGCAGCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGAAGTTACATCTT CTCAGCTTAAAAATTGGTTGAACAATCGAAAAGCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGAGGGCTGATTCT AGGGTCCCATGACTCTCCTGATAGTATCCGTCATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATCCTGACCCTGCC AGGGCCAAATCTGTGGATGCCGGTCATCCAAAAGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGATATTGGCAAAG GGAAGATAGTTCAAATGCATGGTACATGGCATGGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTTGATAAAGGACT TCAGCTACCCTTCCCATCAGAAGACACTGGCACCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTCACAATATTCAT GTGTTGCAGTCTGAATGAGTTCAATGATACTTCTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAGCTTATGATATT AACATAAGTTTACAGCAGCAATAATAATTAGTAGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTCTGCTGAGCAAG GTAGGACTTGCTGAGATTTGAAATTATATGGTTTCCATATGTTGAACTTGTTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_153428; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527218
Blastp | Nodulin homeobox from Arabidopsis with 45.54% of identity |
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Blastx | Nodulin homeobox from Arabidopsis with 45.75% of identity |
Eggnog | HOX(ENOG410XTJ0) |
Kegg | Link to kegg annotations (AT4G03090) |
CantataDB | Link to cantataDB annotations (CNT0002267) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413509.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |