Id Trinity | TRINITY_DN47540_c0_g1_i9 |
---|---|
Name Transcript | Ll_transcript_527223 |
Sequence | TCTCCTTATTCTACCTTCCAATCACACCTCAACTCTGCGTTGCGTTTCATTCTTCTAAGTATTGATTCATCGTCATCTTCTTATTCTACCTTCCAATCAC CCGCACTCGTTACAATTATTTATTGATGTTTCATTTGATTGGCCACTGTTGTTATTGTATTCCTTCATTCCATTCCATTCCATTCCTAAACTACTCCTTT CGCTTTCCAATTTCCTTTTCTGTCCATAGTGAAACCCGTTTTGGTTTATCACTCAAAGATCACGAATGTGATCGAAATAGTATGTACTAAGGATTAAAGT GTCCAAATTTTTTTTGACCAACATTTCGAATCTTCAACATTGTTATTTGGTACACACACAAAACTTTAAGGACCCAAATGAGTCTTCAATCCTTTTCTCT GTTTCTATGTTTCACTCACTCAGTTCGAATCTTCAGCATCTACCTTCATGATTTTCCCTATTTCAAAGTGTGCATATGGTGCAGTTATTTGTGGTCCCGA GATCAAGCCCTACGTATGTAGCTGCATTAAATATTGAAGAGAGGGATCTGCTGCCCCTAGTGGTACTACTCGACTCGAGTAGGATTGTCTCCCGTGAAGA ATACTTGTGGTCCCAAACCAAAAATATGGATTACGGATAGTTCAGATTGGACGTTTTCTTGAAAGAGAGCTAATTCTGCTTTGATGGCTGTACCAGACAC AAAAATTAAAAGAATGAGGATCACCACAGGCGAGCCATCTAGCCATCGTGCACAGGTGATAGACTTTAGATCAGCAGTGAACGAATTGAATGGGATTAAC TCACAGGATCTTTATAGATTATTGAAGGATGCTGAAAATTTTACTATTCACTACCTTACCAAAAAAGAATCACTACTGAAGATTGATATGGACAAGCTTG TGAAACATCTTCCAGTGCACCTTACTGCAGTGTTAATGAGATCTGGTAGAGATGAAGGCATGTTCAGATACTTGTTATGTGGTATTCGCCTGTTGCATTC CTTGTGCAATGTAGCCCCCCGACTTCCTAAATTTGATCAGATTTTTCTGGATGATATGGAAATATTGGAACAGCTAATGGATTTGGTTTTCTACATGCTT GTTGTTCTTAGTGGCTACAGACAGGAAGACAATGCTTTTAGTCATATGTGCCTTTTGCATTCAGCTCTTGTAGCATGCGACCTATGTCTATTAACAGGGT TTATTTCGCCACAATGGCGAGAAACTGTCCCTGTATTGCTTGCGCATCCAAAGGTTGACATGTTTATGGAAGCAGCTTTTGGATCAGTTCGTGTGGTTGT TAGGTGTCTTGAGATTACACTAGCAGCTTGCTACATAGATTTTTCCATGGAATCAAATCTGACAGCTGAACAAGTACTTTATTATCTCTGCCAGCAGTGT GAGGCTTCATTGCAGTTTCTTCAGTCATTATGCCAACAAAGCTTGTTTAAGGAGCGTCTGCTTAAGAATCAGGAACTGTGTAGAAAGGGCAGCATTCTTT TTCTGGCTCAATCCATCTTGAAGCTTGACAGTCAACATTCTTTCCCGACTAGGATTGTGGCTGCTATTTCGAGGCTAAAAGCTAAGATATTATCCATTCT GCTCAGTTTGTGTGAAGCAGAAAGCCTTTCTTTTCTTGATGAAGTTGCCAGTTCATCACAAAGTTTAGATGTGGCTAAATCTATTGCATTGCTGGTTCTT GACTTGTTGAAGACTGCTTTTGGAAGAGGTCCAGGGCATCTCACTGCTGCTGACAGAAGTTGCCCAATGGGGTTAGTACAGCTCAATGCCATGCGTTTAG CTGTCATCCTCTCCGATGATTCAAACTTCAAATCTTACCTCATAGATTGTTTTACTGATGTTCTGACAGCAATAATCTCACTCTCCCATAGAGATTTTTT ATCTTGTTGGTGTTCATCTAATCTCCTAGAAATAGAGGAAGATGCAACTCTTGAATATGATACATTTACTGCAGTTGGGTGGATTCTGGATAATACTGCA TCACTCGATCAACAGAACGCAACAATTTTGGAACTGAGCCTAATCCCTAAGAGAATGTCTCGTGCTTATTATGCACATCATAGGACATCATTATTTGTCA AGGTCATTGCAAATCTTTATTGTTTTCTTCCAGACATCTGTAAAGAACAGGAGAGGAACCATTTCATTCTCAAGGTCCTGCACTGCTTGCAAATGGATCT ATCTAACTTGCTTCCTGGGTTTTCCTTTCCTTCTGGTGCTCCTAAAGCTGCCACTGCTAGCAAGAATCTCTGGTCATTGATAATTCAAGCAGAATCTTTT GTCCCAAACTTTTTAAATCCGGAAGATGTACAACTTCTAAGGGTATTTTCTGGTGAACTACAATCATTAATTACTTCTACTGGCTTTGAGGGAAATCGTG TCCAAGATGCTCAGATTACAAGGGGATGCTCACCTTCTCTGCGATTAAACATAAACCATGCTGAACTTAATAAGAGGAGTGGTAACATGAAGGGTGGAAT GTTTGAGACTTCAGCTTTTCCAGGCATTGTCCAGCATAATACCATAGCTGAAAATGCAAAACAAGGACGTGACCTAAATAGGAAAGAGCGCGTAGAAGGT AAAGGTATATCTGGAAAAATTGTATTTGGAGGAACAAGTGATATGGACAAGGACCTTCAGAATGCTGAAAGAAGTGCTTCAGATACTATAAAGATATTTG GAGAAAGTCCAGAGGATGAAAAGACTGAAACAATGCAGAGGAGAAAACGAAAGCGAACTATAATGAATGATGAACAGGTGACTCTGATTGAGAGGGCTAT CTTGGACGAGCCGGATATGCAGCGAAATACAGCTTCACTTCAATCATGGGCTGCTGAATTAAGTCTTCATGGTTCTGAAGTTACATCTTCTCAGCTTAAA AATTGGTTGAACAATCGAAAAGCTAGGCTTGCCCGCACAGTTAAGGATATAGACAATCGAGTCCCAGAAAAGCAAAGAGGGCTGATTCTAGGGTCCCATG ACTCTCCTGATAGTATCCGTCATGCTTCAAAAGCAAGAAAAGATGTTAATCTCACAATAATAGCTTCTGGCGATAATCCTGACCCTGCCAGGGCCAAATC TGTGGATGCCGGTCATCCAAAAGATGTTCGATGTGTTGCAGGTCAGTCTGTCAGGCTTCTAGATATGTGGAGAAATGATATTGGCAAAGGGAAGATAGTT CAAATGCATGGTACATGGCATGGTAAGAGGTTGGAGAAATTGCAAGCCTATGTTGTTGATGTTTATGAGCTCAATGTTGATAAAGGACTTCAGCTACCCT TCCCATCAGAAGACACTGGCACCTCATTTGCAGAGGCTGAAACAAAGTTTGGTGTCATGAGAGTGTTATGGGGTTTTCACAATATTCATGTGTTGCAGTC TGAATGAGTTCAATGATACTTCTGTTGCTCATATTTTGCTGCCAGCTTCAAGCAGAAAAACTTAGCAAGGGAATATAGCTTATGATATTAACATAAGTTT ACAGCAGCAATAATAATTAGTAGCTTATTCTACAAAACATGTTTATAAGAAATATCTAGCGACATTTTATAGACATTCTGCTGAGCAAGGTAGGACTTGC TGAGATTTGAAATTATATGGTTTCCATATGTTGAACTTGTTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_153428; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527223
Blastp | Nodulin homeobox from Arabidopsis with 41.08% of identity |
---|---|
Blastx | Nodulin homeobox from Arabidopsis with 41.08% of identity |
Eggnog | HOX(ENOG410XTJ0) |
Kegg | Link to kegg annotations (AT4G03090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413509.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |