| Id Trinity | TRINITY_DN47542_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_526441 |
| Sequence | AAATGCTCCTGACCTTTGTCAGAAATGAACATTTAGCACGCAAGAGACACGGCAATATGTTATTATGAATCACATCGGCTAATTTTGTTCATCATCATTC CACCTTATGAATGATCACCTGTCACCTTGTCACCATTTACTTTTTATTACATTTTTTCCTCTCAATTTCACTTTCTTTCATGGTAGTTAGTTTCATTTCC AACCAACTTTGTTTCATCCTTGTACCCGTCCAATATTTTGATATCCACCACCATCTCCACCACCGCTCCTCCACCCTTCTTCTGAGTTTGTTCTCCCTTC CACCATGGGCAACTGTTGCCCAGGTGGTGCCGAAGCCCCAGCCGACAACGCTGAAGCCGACAAGGGAGAAACCAACAACCAACAAAGTAGCGAAAACAAC AATGACGCCTCGGCCACAACCCCACCACCATCATCAAAACCATCACCCCCACCTTCTTCTAAGCCAGCAAAACAAGCCCCCATTGGCCCTGTCCTTGGGA GGCCAATGGAGGATGTGAAAGCCACCTACAGCATTGGGAAGGAGCTAGGGAGAGGGCAATTTGGTGTGACACATTTGTGCACACACAAGGCCAGTGGAAA ACAATATGCATGCAAGACCATTGCCAAGAGGAAGCTTGTGAACAAGGAGGACCTAGAGGATGTTAGGAGGGAGGTACAAATCATGCATCACCTTACTGGG CAGCCTAACATTGTCGAACTTGTCGGTGCCTTCGAGGACAAGCAATCTGTGAATTTGGTGATGGAGTTGTGTGCTGGCGGCGAGCTTTTCGATCGTATGA TCGCAAAAGGACATTACACTGAGCGTGGCGCTGCTTCCTTATTGAGAACCATTGTCCAGATTGTCCATACTTGCCATTCCATGGGTGTCATTCATAGGGA CCTTAAGCCTGAGAATTTTCTCCTGTTGAACAAGGATGAGAATTCACCCCTCAAGGCAACAGATTTTGGCCTATCAGTTTTTTACAAGCAAGGAGAGGTT TTTAAAGACCTTGTTGGAAGTGCATATTACATTGCACCAGAGGTCTTGAAGAGGAAATATGGACCTGAAGTTGATATTTGGAGTGTTGGTGTAATACTAT ACATTCTTTTATGTGGTGTTCCTCCATTCTGGGCAGAATCCGAAACTGGGATATTCAATGCCATTCTACGAGGTCACATTGACTTTACCAGTGATCCATG GCCCTCTATTTCACCTCAGGCAAAAGATCTTGTTAGGAAAATGTTGAATATGGATCCCAAGCAGAGGCTGACAGCATATCAAGTCTTGAATCATCCATGG ATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAATGCAGTATTGAATAGGCTCAAACAATTCAGAGCAATGGACCAATTCAAGAAAGTAGCTC TGAAGGTCATTGCTGGGTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAAAGGGATGGATACTGATAACAGTGGAACCATTACAATTGA AGAGCTCAAGCAAGGGCTTGCAAAACAAGGGACTAAGTTGACAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAATCATA GATTACGACGAGTTTATCGCAGCCACAATGCACATGAACCGGATGAACAGAGCAGACCATGTTTATACTGCATTCCAATACTTTGATAAAGATAATAGCG GCTACATAACTATTGAAGAACTAGAGCAGGCTCTCCATGAATATAATATGCATGATGGTAGGGACATCAAGGAAATCATTGCAGAAGTTGATGCAGATAA TGACGGGCGAATCAACTATGACGAGTTTGCAGCAATGATGACTAAAGGACACACAGAAACAGTTCCTACGAAGAAAAGGCGTGATTCATTTATTTCATAA CCGGGATGTATTCTCTTTCAGCCCTGTGCTCTTGGCTGGTGCATAAGCTATTGAATGAAGGATCAAGGACTGTGATGCATCAGAGCTCTCTTTGGTTGGG AGGGGATATAAGTGAGGCATGGAACGAGGTGGGAAAATAAAAACAAAATACAAGGGGGGGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153456; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526441
| Blastp | Calcium-dependent protein kinase 17 from Arabidopsis with 79.85% of identity |
|---|---|
| Blastx | Calcium-dependent protein kinase 17 from Arabidopsis with 79.58% of identity |
| Eggnog | calcium-dependent protein kinase(ENOG410XRMJ) |
| Kegg | Link to kegg annotations (AT5G12180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457090.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |