Id Trinity | TRINITY_DN47544_c1_g3_i1 |
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Name Transcript | Ll_transcript_525296 |
Sequence | ATCCACGTATATTTGGTGTTAAAGTGGACATTTTTTCCCATAACTCGAATGGAAAAAGTGTCTGCTGTAACAAGAGTTAGTCTCACGATGTTTCCAGCTC GGACATGATTGCTTTCGGTGCGTGACACCTGTGTGAAACAAATGTTATCTTTATGAATAAGCTTTTTTTGTCCTTATCAATTTGATATTTGAAAACTTGA ATTAACTGGAAGTTAAACTTTCCGTGGTTAGGAATAGATTATTAAAGTTACTAGTTAGTACCGTTTTTTGTGTGCAATATGTGTGATTAACTGCAGATGG TGATTGCAGACTTTGATTTTGATAATTGAAATGCATTGGTGTTGTTTTGGGATTTCAAATTCACAGGTGGAGAGTCTATTCCTATTTCGGAAGCAGATTC TGATGTGCTTGCAACTTACATGCAGGATGTGGAACAAAGATCTGAAGAAATCTTTGTTCCATTCAAGAAACTCTGCAAAATAAACACCGTGGAAACCTTG CTGCTAGAAGATGACAATCCTGCTAATGCACTTCTTAGCTTTATCTCGGAGTCTGACATCCAAATATTAGTGATGGGCTCTTACTCCTCAAATTTTATAA CAAGGAAGCTAAAAGGACCAGGGATACCAACAACTGTTCTAAGATGTGCACCTGACAGCTGTGATGTATATCTTGTAGCTCGAGATAGAATTATATCGAA GCTATCCGATTCTTTAGCTTCAGCTTCTTATGAGACTAGTTCAAGGTACTCCATGTCTACTCAAGTGAGTAAAGGAGAAAATGGTTCTGGCATTGGTAGC GAAGCATCTAGATTTAATTCATCCTCAGCAGAACCTAAAAGTCCAAAAAATTTCAAGTTTTTGTCAATATCAGCTCGTAGTTACATCGGTCTTCAGATAT CTAGTCACAGGAGTTCTTTTAAAAATCATACTAGAAATGAAGAAAATCCAGAAAGTTGTGGTGATGATTTTGAAACTTTTAGCCTCTACTCATTTGATTC CGTAGCTTCTGTACAACGTGAACAGTTAGCCGTACAAGAAGAAGTGGAACGTCTACAGCTGGAGTTGCAGAATACTGTTGCAATGTACAAACAAGCATGT GAAGAGCTGGTTCATGCTCAAAGCAAGGCCCTTTTACTCTCTTCTGAATCTCTTGAAGAAGCTAAAAGAGTAAATGATTCCCTGAAAAGAGAGGAGACTT TGAGAAAGATTGCTGCTGAAGAGAATACAAAGTATTTAAAAGTCATGAAGGAGCTTCAGGAGGCAAAAGAAATGTTTGCCAAAGAGTCATATGAAAGACA GTTGGCTGAACTAAATGTTGCAAGAGAGTCCATAGAAAAGCGGAGGATAGTGGATACATTGCTCTCAAATGATAGGAGATACAGAAAGTACACTATAGAT GAAATCCAGATAGCGACAAACTTCTTCTCCGAGGACTTGATAATTGGGGAAGGAGGGTACGGGAAAGTTTATAAGTGCACTCTGGATCACACACCAGTAG CTGTAAAGGTTCTGCACCACGATACAATGAACAAGAAAGAAGAATTTCTGATAGAGGTTGAGATTCTTAGTCAGCTACACCACCCAAATATGGTTTTGTT ACTTGGAGGATGTCCTGAGAAGGGTTGTCTTGTTTATGAATACATGGAAAATGGTAGTCTTGAAGATTATCTTTTCGGTAAGGGAAAAGCACCACTGCCT TGGTATGTTAGATTCCATATAGCTTTTGAAATGGCTTGTGGGCTCTCATTCTTGCATAATGCCAAGCCAGAGCCTATTGTTCATCGAGATATGAAACCTG GCAATATCTTGTTAGACAAAAATTATGTGAGCAAAATTTCAGATGTAGGGCTGGCTAAACTCCTTGAAGATGTTGTGCCTGACAATGTCACAGAGTACAG AGAATCTGTGCTTGCTGGAACTATACACTACATGGATCCAGAGTATCAGAGGACCGGCACCGTCCGACCAAAATCAGATGTATATGCTTTTGGAGTCATA ACTCTCCAATTGTTAACTGGTCGCCATGCACGAGGAGTTATTATGACTGTTGAAGATGCAATTATAAAAGGTTCCTTCCATGATATTTTAGATAGATCAG CTGGAGATTGGCCACTGGAAGAGGCAGCAGAGTTGGCCCAAATCGCCCTTAGATGCGTTGAACTTAGATGCAGAGATAGACCAGAACTTGACACTGAAGT TCTTCCCGTGCTCAAAAGACTTTCTGATGTGACAAATGCTAGTGCAAGAGTCGGAGTAAATAGCAGAGGCACACCAAGCCAGTATTATTGTCCAATCCTT CAGGAAATAATGGATGATCCACATATTGCTGCGGACGGTTTTACTTATGAATACAGAGCAATCAAGGCATGGCTCAGCAAACACGATGTGTCACCCGTGA CAAAGCGCAAACTCAAGCATTCTATGTTGACTCCAAACCAAACTTTACGTTCTGCCATTCAGGAGTGGAAATCAGGAGTGACTTCATTTGATTAGCAAGC ATTTGAAAGATTATTACATTGCTGGAAACTCAAACAACCTTTACACTTTGCCCATTGAGAATTCCCCACTGCTCATTTTAGCTTGCTTTTACATGCACCA TTAAAACTGTCAGTAGTTTGATTTGCAAATAGGTTTGCAAAACAATTTTGGAAATTTAAGTAAAGCATCTCTTACATAGAATATATTATAAAAAGAGAAA AAAGTTGTATATATACTTTGTTAAGCCCTTGTTTGAATTGTATTTAAGTTCAGTTATAGACAGACATGTGTTCAGTTATAGTGTAGATGAAATATTAGCA GTTAAGATATTAATGTACAGTGAGACTTTGTTCCATTATGTATAGATACGTGTACAAGTCTAATAATCATAAACTTTTATATGCTTCATGTAATGAAATT AACTACAGTAGTACAGTACTACTGGGGAAGTTTTGTATTTTATTGTGACATTTAAAGCTTTATAATATATTAATATTCTTCTTCTGATAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_153464; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525296
Blastp | U-box domain-containing protein 34 from Arabidopsis with 48.42% of identity |
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Blastx | U-box domain-containing protein 34 from Arabidopsis with 48.54% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G19410) |
CantataDB | Link to cantataDB annotations (CNT0001800) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455036.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |