Ll_transcript_525315

• Id Trinity: TRINITY_DN47544_c1_g3_i5
• Name Transcript: Ll_transcript_525315
• Sequence: AAACAATTTAAATCAAAGGCGTGAAGCACCAAATAAAGGAAGTAATAGAAGCAAACAAGTCTAGTTGACCACCAACTTACCCCATTCTCAAACAATTACA AAATGTCAACCTCCCTCGCCGCCGCCGCCGGATTCAGATCACTTGCCGTTGCCGTTACTGGTGGCTCCGGCACCGGCAGTGGTAGCCGTCGAGCCGTAGA TTGGGCGGTCGAGAATCTCTTGCCTCAAGCTGATAGGTTCATCTTAGTCCACGTCATCCCCGCAATCACTTCAATTCCAACACCAAGTGGAGAGTCTATT CCTATTTCGGAAGCAGATTCTGATGTGCTTGCAACTTACATGCAGGATGTGGAACAAAGATCTGAAGAAATCTTTGTTCCATTCAAGAAACTCTGCAAAA TAAACACCGTGGAAACCTTGCTGCTAGAAGATGACAATCCTGCTAATGCACTTCTTAGCTTTATCTCGGAGTCTGACATCCAAATATTAGTGATGGGCTC TTACTCCTCAAATTTTATAACAAGGAAGCTAAAAGGACCAGGGATACCAACAACTGTTCTAAGATGTGCACCTGACAGCTGTGATGTATATCTTGTAGCT CGAGATAGAATTATATCGAAGCTATCCGATTCTTTAGCTTCAGCTTCTTATGAGACTAGTTCAAGGTACTCCATGTCTACTCAAGTGAGTAAAGGAGAAA ATGGTTCTGGCATTGGTAGCGAAGCATCTAGATTTAATTCATCCTCAGCAGAACCTAAAAGTCCAAAAAATTTCAAGTTTTTGTCAATATCAGCTCGTAG TTACATCGGTCTTCAGATATCTAGTCACAGGAGTTCTTTTAAAAATCATACTAGAAATGAAGAAAATCCAGAAAGTTGTGGTGATGATTTTGAAACTTTT AGCCTCTACTCATTTGATTCCGTAGCTTCTGTACAACGTGAACAGTTAGCCGTACAAGAAGAAGTGGAACGTCTACAGCTGGAGTTGCAGAATACTGTTG CAATGTACAAACAAGCATGTGAAGAGCTGGTTCATGCTCAAAGCAAGGCCCTTTTACTCTCTTCTGAATCTCTTGAAGAAGCTAAAAGAGTAAATGATTC CCTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAGAATACAAAGTATTTAAAAGTCATGAAGGAGCTTCAGGAGGCAAAAGAAATGTTTGCC AAAGAGTCATATGAAAGACAGTTGGCTGAACTAAATGTTGCAAGAGAGTCCATAGAAAAGCGGAGGATAGTGGATACATTGCTCTCAAATGATAGGAGAT ACAGAAAGTACACTATAGATGAAATCCAGATAGCGACAAACTTCTTCTCCGAGGACTTGATAATTGGGGAAGGAGGGTACGGGAAAGTTTATAAGTGCAC TCTGGATCACACACCAGTAGCTGTAAAGGTTCTGCACCACGATACAATGAACAAGAAAGAAGAATTTCTGATAGAGGTTTTGCTTGTACTCTGTTTCTTC TTCCTTTTGAAGTTATTAACATGAGCAGAAGTTTCTGAGACATTGAACTCTCTAAATTGTTATGTCCATCTGACAGAGTTCTTCATATATATTTTAAAAG TTCTAAAGCATGGACTACCTTATAAACCTTACAAATGCAACATCGAGATCTCATTCCTTTGGGAATTTTTCTAATCGGCTATAGTACTATCCCCACAGGA AATTTTAATTTATGAAAAAGTTACTAGTCAGAATTCAGAACAGCTAATCCTTCGATGGTCTAGCTTCATCAGGATTTATTCTTGTTTCTTTCTCTCCTGT AGGCTGCAGTTCCCCTTATCTGAAACCTTGCTGGTTTAAAAGTTCTTAAAGTTTCAAGCTCATGCTCATTTTTTTCTCATTTTCCAATGGTTTCTAATTA CAAGTTTTTTCGAATGTCTTAAGTGAATTAATATCTGGATCTACCTAGTGGAAAAGACCTTGGTTGTTGTTGCTTAATTTAATATTTGAATGTTGCAATA ACAACTGAAAGCTAATACGTAAGTTTCAAATGTCTAAACTCGTGCTCTTTCCTGTTCACTTCTGTTTCTTTCAGGTTGAGATTCTTAGTCAGCTACACCA CCCAAATATGGTTTTGTTACTTGGAGGATGTCCTGAGAAGGGTTGTCTTGTTTATGAATACATGGAAAATGGTAGTCTTGAAGATTATCTTTTCGGTAAG GGAAAAGCACCACTGCCTTGGTATGTTAGATTCCATATAGCTTTTGAAATGGCTTGTGGGCTCTCATTCTTGCATAATGCCAAGCCAGAGCCTATTGTTC ATCGAGATATGAAACCTGGCAATATCTTGTTAGACAAAAATTATGTGAGCAAAATTTCAGATGTAGGGCTGGCTAAACTCCTTGAAGATGTTGTGCCTGA CAATGTCACAGAGTACAGAGAATCTGTGCTTGCTGGAACTATACACTACATGGATCCAGAGTATCAGAGGACCGGCACCGTCCGACCAAAATCAGATGTA TATGCTTTTGGAGTCATAACTCTCCAATTGTTAACTGGTCGCCATGCACGAGGAGTTATTATGACTGTTGAAGATGCAATTATAAAAGGTTCCTTCCATG ATATTTTAGATAGATCAGCTGGAGATTGGCCACTGGAAGAGGCAGCAGAGTTGGCCCAAATCGCCCTTAGATGCGTTGAACTTAGATGCAGAGATAGACC AGAACTTGACACTGAAGTTCTTCCCGTGCTCAAAAGACTTTCTGATGTGACAAATGCTAGTGCAAGAGTCGGAGTAAATAGCAGAGGCACACCAAGCCAG TATTATTGTCCAATCCTTCAGGAAATAATGGATGATCCACATATTGCTGCGGACGGTTTTACTTATGAATACAGAGCAATCAAGGCATGGCTCAGCAAAC ACGATGTGTCACCCGTGACAAAGCGCAAACTCAAGCATTCTATGTTGACTCCAAACCAAACTTTACGTTCTGCCATTCAGGAGTGGAAATCAGGAGTGAC TTCATTTGATTAGCAAGCATTTGAAAGATTATTACATTGCTGGAAACTCAAACAACCTTTACACTTTGCCCATTGAGAATTCCCCACTGCTCATTTTAGC TTGCTTTTACATGCACCATTAAAACTGTCAGTAGTTTGATTTGCAAATAGGTTTGCAAAACAATTTTGGAAATTTAAGTAAAGCATCTCTTACATAGAAT ATATTATAAAAAGAGAAAAAAGTTGTATATATACTTTGTTAAGCCCTTGTTTGAATTGTATTTAAGTTCAGTTATAGACAGACATGTGTTCAGTTATAGT GTAGATGAAATATTAGCAGTTAAGATATTAATGTACAGTGAGACTTTGTTCCATTATGTATAGATACGTGTACAAGTCTAATAATCATAAACTTTTATAT GCTTCATGTAATGAAATTAACTACAGTAGTACAGTACTACTGGGGAAGTTTTGTATTTTATTGTGACATTTAAAGCTTTATAATATATTAATATTCTTCT TCTGATAAAAAA
• Tissue: pods
• Gene name: LI_gene_153464;
• Additional information: details;

Expression of Ll_transcript_525315

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 0.3
• PW2: 0.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525315

• Blastp: U-box domain-containing protein 34 from Arabidopsis with 37.62% of identity
• Blastx: U-box domain-containing protein 34 from Arabidopsis with 65.48% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT2G19410)
• CantataDB: Link to cantataDB annotations (CNT0001800)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455036.1)
• Pfam: Universal stress protein family (PF00582.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;