Ll_transcript_525274

• Id Trinity: TRINITY_DN47545_c0_g1_i16
• Name Transcript: Ll_transcript_525274
• Sequence: GTTGATTTATATTATTTTTATTTGAGAGTCATTAATAGTTATTCTACCACCTTTCTCCTTTTTGGAAGAGAATCTTCTTCACCTTAAATTAATATACCCC TACTCTTTAAAAAAATCAATTACAAGTCTGGCTTCCCTTTTCTAATTTGACCTCAATCTTTCCAATTTTGAAGCTTATGTGTAAAGAGAAATTAGATAAT TGATTTATCTGTATATAGTGGTTTAAGATTATTAAAGCAGTTATATAATAGAATGGGCCATTGGCCCAAAACAGGTGTCGCTGTAGATATAAGTAACGAA TCGAAAGTTGAATGATTGAATTAATCGAAATTGAAAATCATCATCAACATCGATGGATCTGGAGGTAGTTGGGCGTCACGCGATGCTGTTCGACGATGAC AGCTTGGCGGCGTTTGTGAACTCACCTTCTGCTCTCGTCGATTGGAACTCTCTCTCTATTGATCGCTACGATGTTCGCCACCTCCTCCCTTCTCCGCTTC CACCTCGCCGCCATCTTCACCGCCCTTCCCTTCAACCTTACCTTGACCACGAACGCTATCTCTATCTCCCTTCTTCTTCTCCCAACCAACAACCACAAGG TTTAACCTCTTTTCATCTTTTCTTATTATTACTTATTTCGTTTATAGCTTGTCTTTTCAAAACTATTACTTATTTCGTTTATTTACTCTCAAATTTTACT TACCATTACGTAGATGCGATCATTTTGGTTTATGATTTTTTGTTTTATGAATTGTTGAAGGTAAAGGCTTTTAATATTTAAGGGAGATATGTGTGATTCC TCTGGATAGGAGGGAGGGGTGTTGATTGTAATTAAACTGAACATTAAGGGGTATATGTGTGATTCGCCTAATAATCTTCAAGTAAATATGGTTTACCAAG TTTGTTCAATTTGTTTTTATCATTTGAACATATTAGAGTATTTGGTTAAGGTAGGATATGACATTTAGTTGAGGAGACTAGGTGATGATGGGTAAATTGT GTGTTTTTTCTTTGTGCCACAACTATCTCCACACTTGCAGGATGGAAGGTAATTCGCTACGGTTCCTGTGTCAGAATACAAGTAAGGATGTTTTCGCATG GCTTCCATTTTCCTTTAGAATCTTCTGTCAATGTTAGTGCCGATACTGTTTGATGTGTATTATATTGTTGCAGTTGAGAATTGTATGTGGTTCTAATGAT AAATATCATCTTTCTGTCTTTGTTTAGATGATGGTTCAGATCCAGTGATCTCGGATGGGGATGGCTATCGTGCTGTTCCGTTTAAATATGCAAATCCTAA TGACCCGGCTGAGACAAGAGACAGTGATACGGAGTCTGCATATCGTCCTCCCTTCCCTGTACCAGAAAGATTACTCCATAGTCTGTGTGATTAGGTGATA ATTGTCTAGGGTGCATATGTTATTCTAAGGCTTACAATGTCTAAGTTTCAGATGCTTGGAGCATAAATGGAGTTCTTGTGACTCAAGGTAGCCATTCTCA GGCACCTTGTTTCCTTTTGATGTCATGAGAAGGGTCTGTGCAGGTTGGATTAGGATGATAGAAATTGGTTGATTCTTTACCTCGAGAGCAAATGGGATGA AATTTATCTTCTTAAAGTCCTGTTTCTTGATCTTTATGGTTATGCAAGTATATTTGAGGTTATCTTATGTTTGTTTAGTGAGATATTTATGTATTTCTGC CTGCGAAGACCTTTTAAAAGTTATATTTATGCTAATTTTTTGAAATTCACACTTATTGATGAAGAAACCTTTTTTGTTTGTATTTTCAGCCTCCAAACGA GAAGGTACATCAGATTATCTCAAGGACTGCAATTTTTGTCAGCAAACATGGAAGCCAGTCAGAAATTGTCCTGAGGGTGAAACAAGGAAACAATCCAACA TTTGGGTTCCTGATGCCTGATCATCATCTTCATGCATATTTTAGGTTTCTTGTTGATCATCAAGAACTTTTGAAAGGTGACAAAGATGATACCATCGGCA ACCCATCTGTTGACAAGAATAAAAGTCAGGGGCTTGACCAAACAGGTGGTGCATTGTCTTTGCTTGGATCAGTTTATGGATCTGGAGAGGATGAGGATGG TACAACCGATAATACTCATGACTTCAAGAGAAACGAATGTGAAGGAGCTGTTGATGCTGTTAGTGCTCATGATTCTGCAGGAGTAGAACCCGCAGAGTCA TCTCCAGATGCAGCCAAGAAGGATGGAAGCATTTCTAGAAGTCCGATATCTTCGAAAGAAAATGTTCCTGTCATTAAGCGGAACCAGCCTATCAGTACTG TCAAGGCAGCAATCGCAGCTAGGGCAAAAACAACTGATGCATTGGATTTAGTGTCTAATGTGGTAGACAAATCACAGGTTTCTGTGCCCAATAAAGTTAA GATTGAACTACCCGTTGTGGAGCCCCCATCTAGCATAAAGGAAGTTATTGAGAAGGTGGTTGAGTTCATTTCAAAAAATGGAAAACAATTTGAGGCTGTT CTTGCTGAACAGGATCGTGCTAATGGAAGGTTCCCATTTCTTGTGCCGTCTAATCGATATCATACCTATTATCTGAAAGTTCTTCAAACTTCTGAAGATT CTAAGTTACCAGGCAAGGGCTTGCAAAGGCACAATTCAGCAGGTCGTTCAGGGGACAATAATTCTATTGCACACGAAGAAAGTGATAATTCTTCATTTGG ATCTGTGAGCTCTGATATACCACATGATATGGACCGCAAAGAGAAGTTTAAGTCGATTGTCAGAAAGTCGAAGAAGGATGGTCAAGATGCAACTCCCGAA GACATCCAAACTCAGACCATGGTGTGCATGGATGCAGCAGCAGCTGCTGCTATTCTTCAGGCTGCCACTAGGGGTATTAAAAACCCTAATTTAGAAATAT TTAGCAAGACATCAAGTGGTAGCAGTCAAGGCCTTGGAAGTTATGTCAAAAGCCCAAATCTGAATGCAGAGGATAGTGCTTCTGTCCCTGTTGGCAAGGC TATTCGAGAAAAGGTCAATATTGCTGTAGCAGGTGAGGCAGACTCCTCTGAAGCAAATATGACTAAAGAGAAGATTAAGGCAGAGAGACTGAAACGAGCG AAGATGTTTGCAGCCATGATAAAAAGCAGAGCTGAGCCACTCAAGAGTGAAGTCCCACGTGGTTTATCAGTTGAGCCACCAGGCTATGGACTTTCAAGTT CAGATGCTGAGACTGGGAATCTTATGGGTGAAGAAAGAAAAGGAAGTTCTGTTCCACTAGATGTTGATAATTCAGATAAAAGTCAGAAGTCTGAGGAGAA ACTTTCTGTTGATAAATCAAACGAAAGTCACAAATCTAAGGAGAAACTTGCTGTTGATAACGATGAACGGCGGTCGAAAAGAAAGTACCGTTCAAGATCC AGTAGACATGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGTGGCGGCGAAGATGGAGGGAGAAAGAAGGAGGCGATATTGGTATTGGCAGAGGCAGGGAG GTCAGTGGAGAGTTTGCCAGGTGACTTGGCGGCGGCCGTAAAAGAAGGGAGGATCGGAGGTGCGGTGGTGAGTCGGTTACTGGAAATGGAGAAATCAGCG TTGTTGAGATGGTTACTTCAGTTTGGTGGATTCAAGGAACGTCTTCTCGCTGATGATCTCTTTCTTGCTAAACTTGCTATGGAGTGCGGTGTTGGCGTCT TCACCAAGACTGCTGCTGAGTACGACCGCAGGAGAGACAAGTTTTTTGATGAGCTGGAAATTGTTTTCGCTGATGTGGTCATGGCCATACTTGCAGATTT CATGCTGGTTTATCTTCCGGCACCGACTGTATCTCTTAGACCACCACTTGCAATCAATGCAGGCCATATAGCCAAGTTTTTCCACAACTGCCCAGATAAT GCATTCCAGGTTGCTCTCTCAGGAACACCATATTCCTTATTACAGAGAATTGGTGCTATTGTGCGTAATGGATCTAAGCTTTTTGCTGTTGGAACTGCTT CATCCTTGGTTAGTTTCTTATCCTCCTCTGCCCCTTATGCTCCTTTTTCTGGTTTAAAATTTTGACTATGAAGTTTTTTTGTCGAGTTTTTTCCATTTCT TGAACTTTTGTTCTCCCTAACTTTACGGCCAATTTTGGACGTTTATTCATTTGACATCACAGAAAAGTTGAGTAGGCTCATTATTTGGTAATTGAGTTGA CTGACTTGTACCGTACCTCTTGTATCGAACCCCTTTTCACTGGATGGGGTGTGCAGAGTGGGAGTGATTTGGCATAACATATATCTACTATGATGTATGA TCAAGTACTTTAGTACATGTTCTTCAAACAAAAATTTGAAATCATTAATCTACTTGTTTTAAATAGATAGTGATAGTCCTAAAATGTTTTAATTTTTTAT CTTCACTGCATTTGTGTATTGATTCAGGTTGGGACAGCTGTGACAAATGCCTTAATTAATGCAAAGAAAGCTGTTGATAAGTCTTCTGCTGGGGAAATTG AAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTTCTTGCTGGAATTATTGAACAGAG GATTTTGGAACCTCTGCTGCACCAGCACAAGCTTATACTCAGTGCAATGTGCTTTGCTGTTCGTACTGGCAATACCTATTTGGGTTCATTATTGTGGGTG GATTATGCACGTTGGATAGGGGTTCAGTAGGCTCAAGACTACATTTTCTCAACATTTCCACTTGCTTCATTACCAGAACGTGACAAAACTATTTTCTTCA AGAGGATTAACCCATTAGCTTTTCTTCCCCTCTGTATTTATATGCTCATTGTTGAGCACTCTTGCTATTCTTGCTTTTCTCATATATTTATAGTACCACG AGTATGTGGACATCATTTCCAACTCAATCAAAAGTTTGTATTAGATTGAAAGATAAAAATGAGGGTGTCTTACCCAATATGTGGGAGACAAATTTGTTTC TAAATGCAGATTGGAAAATGTTATTTTTCGAACAAACATTTTTGGTCTCCCTTTGTGTTTTTTGATATATTTTTAAAATAGGTGTATTTTTTTTATTACT TAGGGTATCTCGGTGAAGAATTAGTTCACTAGTCACTTTGAGTTGAAGTGTACATATCTCTTTCCAAAAAATATGTATACAGAAG
• Tissue: pods
• Gene name: LI_gene_153472;
• Additional information: details;

Expression of Ll_transcript_525274

FPKM

• PAB: 0.5
• PNAB: 0.7
• PS1: 0.7
• PS2: 0.9
• PS3: 0.7
• PW1: 1.1
• PW2: 1
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525274

• Blastp: Pre-mRNA-splicing factor sap114 from Schizosaccharomyces with 35.38% of identity
• Blastx: Protein RETICULATA-RELATED 4, chloroplastic from Arabidopsis with 76.4% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC22A12.09c)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456009.1)
• Pfam: Surp module (PF01805.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;