Ll_transcript_527359

• Id Trinity: TRINITY_DN47548_c7_g1_i1
• Name Transcript: Ll_transcript_527359
• Sequence: CATCTCATTAATAAACCTCTTTTAAAATAGAAATAGTAATAAATGAAGGAAAACTTAGAATTCTAATAAATATAATCTAACTTATTATCCCAAAGCGTGA AGTGTGGACTGTGAGGCTATGCCAACTTTGCAGTTATGTCCAACCATCCTTCCAATCAAATCGGAAGGGGCTCCTCAGCAACCGGGTCGGAGGCCCAAGG TCAGTCCTCAACTTAACCGCTGGTCAAGGGCTCGATCGATCCGTTCCGGTCGAAAATTAGACCGGTCCAGTCTCCGAACCACAACGCTTGAACCCAACCA ACCCAATCCTCCATCTCCGCTTTCTATTCCACTCGATCCAGATGACGCCGTTAGTGATGACGGCGCTGATGTAAGGTTTGTGAAGTCCATCTACATAGTC TCCGACGGAACCGGATGGACTGCAGAACACTGCGTTAACGCCGCTTTGGGTCAGTTCGATTATTGCTTGGTCGATCATGGTTGCCCCGTCAATACGCATT TGTTCTCTGGGATTGATGATGCAGAGAAGTTATTAGAGATCATAAAGCAATGTGCGAGGGAAGGTGCTTTGCTTGTGTACACATTAGCAGACTCTTCAAT GGCTTCATCTGCTAAAAAAGCATGCAAGTTATGGGGTGTATCCTTTACTGATGTATTAGGACCCATTACAGAGTCCATTGCTACGCATTTGGGTGTCTCT CCCTCCGGCCTTCCTCGCGGTGCCTCAGGCATTCCTCTCTCTGATGATTACTTTCGTAGGATTGAAGCTGTTGAATTCACCATTAAGCAAGATGATGGAG CATGTCCCAAGAATTTGGCCAAGGCTGACATTGTCCTCACTGGTGTTTCTCGCACCGGTAAGACACCCTTGTCAATTTACCTAGCTCAGAAGGGCTACAA GGTGGCCAATGTGCCCATTGTGATGGGTGTTGAAATGCCAAGGACTCTCTTTGAAGTGGATCCATGGAAAGTTTTTGGCTTGACTATAAATCCTGCTGTC TTACAGAACATTAGAAAAACAAGGGCTAAGACTTTGGGATTTAGTTCGGAGTCAACGAGTAATTACTCTGAGAGGGATCACATTAGAGAGGAACTTGAAT TTGCAGGAAGACTCTTTGCTCAGAATCCTGTATGGCCAATCATTGATGTGACTGCAAAAGCAATAGAAGAAACTGCAGCAGTTGTGTTGAGGCTGTACCA TGACCGGAAACATAAGTGCTTGATGCCAAGGATCTCAAAACGCTATTAGAAATGACACTTTTTCCCCATTTTGAACTGCAACTTGTAAACCACCAAAGTT GTAAACTGTTACAATACAGAGTCCACGACTGCTCATAATCATAAGTAGATGGCTTACTTTCTTGTACCACTACTTGTGGGGTAGATTTTAGCAAACAGGT ATGCTTTTTAGATATCATCAAATCTAAACTTTACATGATAATGTTATTATCAATTACTGTACTTTTAAGACATTAGTATTTCCAATCTAAGGAAGAATGT TTGTTAATGTGCCACAACAAAAGTTGAACAGTGGTTTAACTAGGCCCAGCTGCAGAAAAAGGTGTTTTGCTCTGGTGAACCTACTTGTTAATTGTAAAAC TGCAATCAATAAATTTGGTGAATGATGGTGACTTCTTTTTTGTCAAAATTTTCACACGTTCCTGTTTCTTTCTATGGAAAGAACCTTGTGTTTCCTCTAA CCTTTATGGTTTGGATCTCAAACAAATGAAA
• Tissue: pods
• Gene name: LI_gene_153505;
• Additional information: details;

Expression of Ll_transcript_527359

FPKM

• PAB: 24.8
• PNAB: 14.3
• PS1: 11.4
• PS2: 8.3
• PS3: 14
• PW1: 18.7
• PW2: 23.7
• PW3: 27.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_527359

• Blastp: Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic from Arabidopsis with 64.03% of identity
• Blastx: Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic from Arabidopsis with 62.67% of identity
• Eggnog: Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation (By similarity)(COG1806)
• Kegg: Link to kegg annotations (AT4G21210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428071.1)
• Pfam: Kinase/pyrophosphorylase (PF03618.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;