| Id Trinity | TRINITY_DN47548_c7_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_527377 |
| Sequence | TATCCACTAAAATTATGATATATATCAGTATTTAATTATATTGTAAAAAAATATTTCTAATTAGTGTCAGAGAGAACTTATTTCCGATTACTAGGAGGAA CTTTATTGACTTATTAAATATACTATTCATCTGTAAACTTACTTTGATTAATTCCTTCAAGTTTATTAAATATAGTGTTTCGAATTTGAAAGCTTACCTA GCTTAATTTCCTGGAGAGAATGTTTGTTGACTCACACAGTGGACATAGCTTGTCATAAATTTTGTTTGGTCAATAAACTCATCTCATTCATGATTATTGG ATATTTAAATCAATTAATTAAGCATAATAAGTGCCACAACATTGTGGCACACTTTGTGAAACAAGTTCAGTGTTCATTACACTATTTAGCATCTATCTAC CTTTAAATTTATGATAGTTTATTCCAGTTATGTTTTTGATTCAGATTGATGATGCAGAGAAGTTATTAGAGATCATAAAGCAATGTGCGAGGGAAGGTGC TTTGCTTGTGTACACATTAGCAGACTCTTCAATGGCTTCATCTGCTAAAAAAGCATGCAAGTTATGGGGTGTATCCTTTACTGATGTATTAGGACCCATT ACAGAGTCCATTGCTACGCATTTGGGTGTCTCTCCCTCCGGCCTTCCTCGCGGTGCCTCAGGCATTCCTCTCTCTGATGATTACTTTCGTAGGATTGAAG CTGTTGAATTCACCATTAAGCAAGATGATGGAGCATGTCCCAAGAATTTGGCCAAGGCTGACATTGTCCTCACTGGTGTTTCTCGCACCGGTAAGACACC CTTGTCAATTTACCTAGCTCAGAAGGGCTACAAGGTGGCCAATGTGCCCATTGTGATGGGTGTTGAAATGCCAAGGACTCTCTTTGAAGTGGATCCATGG AAAGTTTTTGGCTTGACTATAAATCCTGCTGTCTTACAGAACATTAGAAAAACAAGGGCTAAGACTTTGGGATTTAGTTCGGAGTCAACGAGTAATTACT CTGAGAGGGATCACATTAGAGAGGAACTTGAATTTGCAGGAAGACTCTTTGCTCAGAATCCTGTATGGCCAATCATTGATGTGACTGCAAAAGCAATAGA AGAAACTGCAGCAGTTGTGTTGAGGCTGTACCATGACCGGAAACATAAGTGCTTGATGCCAAGGATCTCAAAACGCTATTAGAAATGACACTTTTTCCCC ATTTTGAACTGCAACTTGTAAACCACCAAAGTTGTAAACTGTTACAATACAGAGTCCACGACTGCTCATAATCATAAGTAGATGGCTTACTTTCTTGTAC CACTACTTGTGGGGTAGATTTTAGCAAACAGGTATGCTTTTTAGATATCATCAAATCTAAACTTTACATGATAATGTTATTATCAATTACTGTACTTTTA AGACATTAGTATTTCCAATCTAAGGAAGAATGTTTGTTAATGTGCCACAACAAAAGTTGAACAGTGGTTTAACTAGGCCCAGCTGCAGAAAAAGGTGTTT TGCTCTGGTGAACCTACTTGTTAATTGTAAAACTGCAATCAATAAATTTGGTGAATGATGGTGACTTCTTTTTTGTCAAAATTTTCACACGTTCCTGTTT CTTTCTATGGAAAGAACCTTGTGTTTCCTCTAACCTTTATGGTTTGGATCTCAAACAAATGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_153505; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527377
| Blastp | Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic from Oryza sativa with 67.48% of identity |
|---|---|
| Blastx | Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic from Arabidopsis with 66.53% of identity |
| Eggnog | Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation (By similarity)(COG1806) |
| Kegg | Link to kegg annotations (4343450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428071.1) |
| Pfam | Kinase/pyrophosphorylase (PF03618.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |