Id Trinity | TRINITY_DN47549_c6_g1_i2 |
---|---|
Name Transcript | Ll_transcript_526678 |
Sequence | TCTTAAAACTACTATACTGCTAGCATTTGTAGTTTTTTGACATACTTCCACCCCCTTAGTCAAGTTGCTTGATACAGTAAATCATAGGACTTGTTCTCTT TTTTGTCATCGAAGATGAGATTTCACTTCACCAACATTGAGGGCATACCCATAACAATGTACCCTTTCTCTAGAATGTGTTTGTTTTGAATACCTTTCCC TGATAAAAGATTTGGTGGTCTATTGGGCTGTGAGCCTACGCCATGCAATGTCTGCAAACCACCGTTCTGAGCATTACATCATTCCTTTCATCTTCACTGA AAAATATGGGTGATCAAGTAGTGGTTGTAGAGAAACTAGATTTGATTCTCTTCCCCATATTTTTTCAAAGTATATTATTTCAAGGAAAATTGTCGTCTTG ACAATCACATGTTTTATCTCCTTTTCTGTCATTCTTTCCAAAATTCTCCTCTTAGATAAATGTTGCAAATAATTCTCATATTATTTAGTTCAAGTCCTAC ATGGGAAGGGAGAGTAGCAATGGACCACATTTCATATTTGTTTCATGTTCTGGATAGCAAAAGAGGGTAGGGTGGTCCATTGCAGAAACTGCACAATCAT CAGTTTGTGTGTGTGATCTGTAACTTTAAAAGTACAGATCATTTGTGACTTGAAGTGTTTCTAATATCTAAGCATCGATGATAGATGTGGTTCTAGCCAA AGAAATGGTGTTTATCTTTTTTGCTTTTTCTAAAAGATGTAAATTATTACCACTTACTATAACCTATTTACAGCTGAGACCTTTAATGCCATCCTAGAGC TACTACCTAGGGAGGGTTCTCAAGGTTTCACCAAAGTCAAACCACAGAACATTCCCTCCATGGAATTACATATTTATCCAATCTTTCACTCTTCCTAAAA ACCTATGCACCATTCAGTCAATTTTTTCCTCCGTATCTATTAGCCATCCTTACAGGCAGCTCCCAATTCTCCATTTTAATTCCATTTGTAGTTGGAATAT TGTTCTGGATTCCTCTGTTTACTTTCAAAGGTCCAGTATCTCTTGCAATCCATATGCTATATATATTGTTTTGCAAATACACTTGTAAAAATAACTCTTC TTATCCTCTGGTATCTCCATATGTGCAGAATATGTCTTTCTTCCAATCTCCCCATTCAGTTGAGAATTTTCTAATATGCAACCACTGCAATAGTGTTTGT CTTAACTAATGTAAATCAGCAAGCAACTATGAGTCCTTTCTATCCTTTTCCCATTCACGTGGACAGTTGAACAACCATACTGAAGTTCTACAAATTTTTG GGAAGCAGCACCTAGTTGAAAATGATTTTTGTCTGATTGTGATCTGGTACCCGTCATATTGTGGGGAAATTCTTTATTCTGTGAGTAGTAATGAAAAAGA AGGTTCGTGCTATTCACTTTGTGATAACTCGTTTTCAAAACATGAATGATCAGAGTTCTAAAATCTAGGACTAGTTACGTTCTTGTTAAATGGTGAATGG TTCCAGGAAAGATTACCCACTTGTGTTGGAGAACTAGAGATATTAACTTTCCTCTAATGAAGGATGAATAACACAGGGAATCTATTAGATTTTTCCTTTA GTATGTTGAATTGTTGTCTAATGTAGGCATGTACTGCAAAAATAAAAGGGTCCAGACTCCAGGCAAGTACTGCAAAAATATAAGCAAAAGCACAAACAAT ATAACACTTTTATCCTTTTATTTATGATGAGATGACACTTTTACACTTAGAAGCAAGAACAAGAATTCCCCCGAGAGGGTAAAAGTGTTCATGGAGGCTT GTGTATATGTATGTTTAAAATTATGATTATTTATATCTCCTTGGATGATATTCATTGGCTCCAAACTTTCTCTGCCAGGTGAATGTAACTGCTGATCACA GAATAATCTATGGGGCTGACTTGGCTGCATTCCTTCAGACATTCTCAAAAATTGTTGAAAACCCTGC BLAST |
Tissue | pods |
Gene name | LI_gene_153523; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526678
Blastp | - |
---|---|
Blastx | Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic from Arabidopsis with 89.66% of identity |
Eggnog | Dehydrogenase(COG0508) |
Kegg | Link to kegg annotations (AT3G25860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461766.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |