| Id Trinity | TRINITY_DN47551_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_525577 |
| Sequence | ATCCCATAAGAAGACTTGGCGAAACTCTCTCTGTCTCACTCGCAGTAGATCCAAATGTCGAAGCTAATCTTCTGTGTGTTCCTAACCTTCACCCTTATTC CACTGCTATGCACCTCTTTCTCTTCCGATACACCCTCAGATCGACGCGTTCTCGTTTTGCTCGATGACTTTGCTCTCAAAACCTCTCACTCTCTCTATTT CAATTCCCTCCATTCTCGCGGCTTCGATCTCGATTTCAAGCTCGCTCATGATCCCAAAATCGCGCTCCAGAGATACGGCCAGTACCTCTACGATGCCCTA ATTCTTCTTTGTCCAACTATCGAACGATTTGGAGGTTCTATTGATGCTGCTGCTATTTTGGATTTTGTTGATTCGGGTCACGATTTGATAGTTGCTGCTG ACAGCAATGCGTCTGATTTGATCAGAGAAATTGCCACTGAGAGTGGAGTGGACTTTGATGAGGATCCTGCATCTTTTGTTGTAGACCATTCTGGTTATGC AGTCTCTGCCTCTGAAGGGGATCATACTTTGATTGCTAGTGATGATTTCATCAAGTCTGACGTGATTTTGGGAAGCAAAAAAATTGAGGCTCCAGTACTT TTCCAAGGGATTGGGCATTCATTAAATCCTTCCAACAGCCTGGTCTTGAAAGTTCTCTCTGCATCTCCTTCAGCATATTCTGCTAATCCAAAATCTAAGT TGACTTCTCCTCCATCACTCACTGGATCTACAATCTCGTTGGTTTCAGTTATACAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTGAGCCT GTTCAGCAACCGGTATGAAATGCTCATGAGTTAAGCAGGGTTTTGTTATGTGTAAGCTCTGAAGTTCTTTTTACTATCATAAACATGGTTTTTTTCTGCA GATTTTTCAGGTCTAGTGTGCAGAAGGCTGGGATTCCAATCAAGCATGAAAAGTCAGGTAATGAGCAGTTCTTGACTGAAGTCAGCAAATGGGTTTTCCA TGAAAGAGGTCACCTCAAGGCGGTGAATGTGCAACACCATAAAATTGGGGAAGCTGACGAACCAGCCATGTATAGGATCAATGATGATTTGGAATACTCT GTTGAAATTTATGAGTGGTCTGGGACAACGTGGGAACCTTATGTGGCTGATGACGTTCAAGTGCAATTTTACATGATGAGCCCCTACGTCTTGAAGACTT TATCAACTGATGGAAAGGGTCGTTACTTCACATCTTTTAAGGTTCCTGATGTGTATGGGGTTTTTCAATTCAAAGTTGACTACAATAAACTTGGATATAC AACCTTATCTTTATCAAAGCAGATTCCTGTCCGTCCCTTCAGACACAATGAATACGAGAGATTTATTCGAGCAGCTTATCCCTATTATGGAGCAGCATTT TCAATGGTAAGGATTTCTCTCTATATCCCAAAAGGTGATAACATATAGCTTTCCTAAGGATAGGTCCAAGTTTCAACCCACTGGTTCATGTTTATGTTTA ATTTAACATTCGACTGTACCATATCATGTAAACTGGTGGAGATAATTTGCTAATCTAGTCCACGCATAGATAATGAATTCCTGACCAAACTTAAACCAAC ATCAATCATTCTTACTAATGCACGTTAAAATTCCGGTTGAGTTGATTTCTCTTAGCAGTACTTGTAAAACTGTGAACTTGCATTCAAATGTTCAATTGAA TTTTAGCAATTTGGACCAAGTGGCACCTACCCTTACTGTCAAAAGGTCCAGATAGTTTCTTTTAAAAACTTCTTGAGATCCTGCGTACATTAAGTTTAAG TTGTAATTAGATGTGTATGTTCTGTCAAATGGATCTTCTTGTGAGTTTCTCGTGGCTTTTGGGTAATATAACTTTTTGATTGTGATGCAGATGGCAGGAT TCTTCATCTTCACTGCGGTTCATTTATACAACAAGTAGGTGTAAACCTTGGCACTAAGATAGTATAACAACATGGGGGTTGGGCTTAAATTTGAGATTGA AAATTTTGATTAGGCAGTAATACAAAAGGATGTTTCTGACTTGCTTTTATTCTGTAAGATGGCCTTACGGTTTAACTTTAGCATGCTTTTAAGTTATTTT AAGTTTAGCATAATTGCTTAGATTTTCTTGATGCCCATAATAACTGACGCGTGTGCTATTATTAGTATTTCAAATGGCTAATCAACACTCCCAACTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_153534; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525577
| Blastp | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit from Oryza sativa with 74.56% of identity |
|---|---|
| Blastx | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit from Arabidopsis with 72.5% of identity |
| Eggnog | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase(ENOG410XSF3) |
| Kegg | Link to kegg annotations (4342702) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413864.1) |
| Pfam | Oligosaccharyltransferase 48 kDa subunit beta (PF03345.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |