Ll_transcript_525378

• Id Trinity: TRINITY_DN47554_c2_g1_i2
• Name Transcript: Ll_transcript_525378
• Sequence: CCTAGTTACTATTAAGTACTAGTACACTACATTCAATAGAAACTTCTAGAATAGCTGAGTCAAGAAGGGTCTAGACTCTTTCACCATTAACATAAAACCC CAACCAAAAACGCACCGTTTATTCTTCCTGTAACCTCATAATCACATTTCACAATGGAAGCAGAGAAGCTTGTTCAGTTGAAGCATTTCATCGAACTCTG CAAATCCAATCCTTCAATTCTCTCCGATCCTTCTCTCTCTTTCTTCCGCGACTACCTCGAAAGTCTCGGTGCCAAGCTTCCACAATCTGCTGAATCCAAA TCGAGAGGTGTGGAGAGTGATGAGGACACGGAGAATGTTAAGGAGGAAAAAGTGAAGGTTGAAGAACCCGAAGAAGAAGAAGAAGATGAGATAATTGAGT CTGATGTTGAGCTCGAGGGCGAAACTGTCGAGCCGGACCATGATTCTCCACAGAAGATGGGAGACCCCTCTGTGGAGGTCACTGAAGAGAATCGTGAGGC TTCACAGGCGGCCAAAGCTAAAGCTGTGGAAGCCATTTCTGAAGGTAAGTTGGATGAGGCAATTGAGAGCTTGACAGAGGCAATTTTGCTCAATCCTACA TCTGCCATAATGTATGCAACTAGAGCCACTGTTTATATCAAAAAGAAGAAGCCCAATGCTGCAATTCGTGATGCAAATGCTGCTTTGGAGATTAATCCTG ATTCGGCGAAGGGCTACAAATCACGTGGCATAGCACGAGCACTGCTTGGTCAGTGGGAAGAGGCTGCAAAGGATCTTCATGTGGCTTCAAAGTTAGACTT CGATGAGGAAATAAGTGCTGTACTTAAGAAGGTGGAACCCAATGCTCACAAGATTGAGGAACACCGTCGGAAGTATGAAAGGCTGCACAAGGAAAAGGAG GAGAAAAAAGCTGAGCGTGAAAGGCAACGTCGCCGTGCTGAAGCTCAGGCTGCATATGAGAAGGCTAAAAAGCAAGAGCAATCATCTTCCAGTAGAAATC CTGGTGGTTTTCCAGGTGGCATGCCTGGTGGCTTTCCTGGAGGCATGCCGGGAGGTGGCTTTCCGGGAGGCATGCCAGGAGGTGGCTTTCCTGGGGGCAT GCCAGGAGGTGGCTTTCCTGGGGGCATGCCAGGAGGAGGCTTTCCTGGGGGCATGCCTGGGGCTGGGGGAATGCCAGGAGGGGTGCCTGGGAATGTTGAT TTTAGCAAAATCTTGAATGATCCTGATCTGATGTCGGCATTTAGTGATCCAGAGGTCATGGCTGCTCTTCAAGATGTTATGAAGAACCCTGCTAATTTGG CTAAGCATCAGTCAAATCCCAAGGTGGCCCCAGTAATTGCGAAAATGATGAGCAAATTTGGTGGTGGTCCTAAGTAAAAATATATTCGAGAATGGCACTG TGCTTGTTTAAGATTTGATGTTTTTTGATATTGCATTTTCATTTTGATGAGATTATGAATATTTACCGTTAGTAAGGCCTGTTTTATATAAGTGCGTATT TCTCCTCTTGGTGACGTTGTTTATTTTTGAGTGAATTTGAATGAAAAAAAAATCTTAAAAAAAGTTACATGGGTGTTAAATGTTATGAAACTCAGGCTGG AAGAGGTCCCGTACTAGTTTCAACCGGTTCAAGTAGTTAAACTGCCTGGTCTGGCCGAGTGATTTAATACATAATTAATAACTTTTATCTATAAATATAT AATTATATATAAATGTAAACCATTTGGTTTAGTGTCTGAGTTAATCTAGTTTAACTGAGTTTAATATGGTCGGTTATTTCTCTTGTTCAAAGTGGTCTAA TGCTCATTTGTTTAAGCTGGTAAATTAGAACTGTTTTTAAGTCCGGTCAATTGTCAAATTGATTAGACTGTTTAGTATGATCTGGTTCTAATAACAATCT GTGTAAGTTACATGTTTTATTTTCTGTAAATTGATAATGAGAAGATTAGTTATTAACTGTTTGGTGTTTGATTTCTGGTTACACTCAAAAGAGGTGGTGC TCCTCAGCCTCCTCTTATATGTGTGGACTTGCACAATAGTAAGTATTTTTTCTAATTTTAGTTCAAGGTTAACAATGTGTAATTTAAAAGCGTGGTATCT ATGCCTGATTTTCCATTTTAAACTTGCAAG
• Tissue: pods
• Gene name: LI_gene_153548;
• Additional information: details;

Expression of Ll_transcript_525378

FPKM

• PAB: 18.9
• PNAB: 45.9
• PS1: 132
• PS2: 99.8
• PS3: 96.2
• PW1: 106.3
• PW2: 59
• PW3: 57.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525378

• Blastp: FAM10 family protein At4g22670 from Arabidopsis with 72.18% of identity
• Blastx: FAM10 family protein At4g22670 from Arabidopsis with 70.83% of identity
• Eggnog: suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)(ENOG410XR19)
• Kegg: Link to kegg annotations (AT4G22670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446678.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;