Id Trinity | TRINITY_DN47554_c2_g1_i6 |
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Name Transcript | Ll_transcript_525383 |
Sequence | CCTAGTTACTATTAAGTACTAGTACACTACATTCAATAGAAACTTCTAGAATAGCTGAGTCAAGAAGGGTCTAGACTCTTTCACCATTAACATAAAACCC CAACCAAAAACGCACCGTTTATTCTTCCTGTAACCTCATAATCACATTTCACAATGGAAGCAGAGAAGCTTGTTCAGTTGAAGCATTTCATCGAACTCTG CAAATCCAATCCTTCAATTCTCTCCGATCCTTCTCTCTCTTTCTTCCGCGACTACCTCGAAAGTCTCGGTGCCAAGCTTCCACAATCTGCTGAATCCAAA TCGAGAGGTGTGGAGAGTGATGAGGACACGGAGAATGTTAAGGAGGAAAAAGTGAAGGTTGAAGAACCCGAAGAAGAAGAAGAAGATGAGATAATTGAGT CTGATGTTGAGCTCGAGGGCGAAACTGTCGAGCCGGACCATGATTCTCCACAGAAGATGGGAGACCCCTCTGTGGAGGTCACTGAAGAGAATCGTGAGGC TTCACAGGCGGCCAAAGCTAAAGCTGTGGAAGCCATTTCTGAAGGTAAGTTGGATGAGGCAATTGAGAGCTTGACAGAGGCAATTTTGCTCAATCCTACA TCTGCCATAATGTATGCAACTAGAGCCACTGTTTATATCAAAAAGAAGAAGCCCAATGCTGCAATTCGTGATGCAAATGCTGCTTTGGAGGTTATATTCT CATCTCTATGTGGCTTAGAGTGACAAACAGAAATATGTCTTTGCTTGACTTCGAATTGGATCTATGCATTTGCTAGTGGCACACTTGTTTAATGTTATTG CATAATGCAGGTGCTTGGAAATGCATGCATTTAGAAAATGTTTAGTATCTAAGCATGTTTTTCTTAGCAGATGCTACCCCAAAGTCAAAAATATCAAATG TGGTACATAATTATTTATGATAGGCAGTCTCATAAAGTATAATTATAGGTGGTACCAATTTAGTGAGTTTAACTGTTCTTCAGTGGACATGTTGCACAAC CCATCTTACTATATCTTCCAGCTGGAATTACTTCTACATGTGTGCATCTTTGATGTGCATACAAGGTTTGTTAGACTGTTAATTATTAAAATTAATTTTT TTATCCAGATTAATCCTGATTCGGCGAAGGGCTACAAATCACGTGGCATAGCACGAGCACTGCTTGGTCAGTGGGAAGAGGCTGCAAAGGATCTTCATGT GGCTTCAAAGTTAGACTTCGATGAGGAAATAAGTGCTGTACTTAAGAAGGTGGAACCCAATGCTCACAAGATTGAGGAACACCGTCGGAAGTATGAAAGG CTGCACAAGGAAAAGGAGGAGAAAAAAGCTGAGCGTGAAAGGCAACGTCGCCGTGCTGAAGCTCAGGCTGCATATGAGAAGGCTAAAAAGCAAGAGCAAT CATCTTCCAGTAGAAATCCTGGTGGTTTTCCAGGTGGCATGCCTGGTGGCTTTCCTGGAGGCATGCCGGGAGGTGGCTTTCCGGGAGGCATGCCAGGAGG TGGCTTTCCTGGGGGCATGCCAGGAGGTGGCTTTCCTGGGGGCATGCCAGGAGGAGGCTTTCCTGGGGGCATGCCTGGGGCTGGGGGAATGCCAGGAGGG GTGCCTGGGAATGTTGATTTTAGCAAAATCTTGAATGATCCTGATCTGATGTCGGCATTTAGTGATCCAGAGGTCATGGCTGCTCTTCAAGATGTTATGA AGAACCCTGCTAATTTGGCTAAGCATCAGTCAAATCCCAAGGTGGCCCCAGTAATTGCGAAAATGATGAGCAAATTTGGTGGTGGTCCTAAGTAAAAATA TATTCGAGAATGGCACTGTGCTTGTTTAAGATTTGATGTTTTTTGATATTGCATTTTCATTTTGATGAGATTATGAATATTTACCGTTAGTAAGGCCTGT TTTATATAAGTGCGTATTTCTCCTCTTGGTGACGTTGTTTATTTTTGAGTGAATTTGAATGAAAAAAAAATCTTAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_153548; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525383
Blastp | FAM10 family protein At4g22670 from Arabidopsis with 77.36% of identity |
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Blastx | FAM10 family protein At4g22670 from Arabidopsis with 66.67% of identity |
Eggnog | suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)(ENOG410XR19) |
Kegg | Link to kegg annotations (AT4G22670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446678.1) |
Pfam | Domain of unknwon function (DUF3824) (PF12868.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |