Id Trinity | TRINITY_DN47565_c1_g1_i11 |
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Name Transcript | Ll_transcript_525608 |
Sequence | AAACCTTCTCCATTCTCACACTTTCCTCCTTTCTCTTCCCTCTCTCTTATCACCAAACTCATTCCATTCCAAAACATGAACTCTCTTTTGGTCTTTTCCA ACATCAAACCCACCTAGCTTTTAGTACCAAACAAAGAACCATACTTTGAAACAAACCTAGTTTAGTTTACTTCTTTAAACTCATAGAAAGTGTTTCTGTT TTTATCTCTTAAACCAAAAATATGATAACTCTTTTAGACTTGTACCATGTTCTCACTGCTGTTGTGCCACTCTATGTGGCCATGATCCTAGCATATGGCT CAGTGAAATGGTGGAAAATCTTCAGCCCTGATCAGTGTTCAGGGATAAACCGTTTTGTTGCACTCTTTGCAGTTCCATTACTGTCATTTCACTTCATCTC CACCAACAACCCTTACGCCATGAACTTCAGATTCATCGCCGCCGATACGCTTCAGAAGATCATCATGCTTTTCGCACTTGCTATGTGGACTAACTTCACC GCCAACGGTAGCCTCGAATGGATGATTACAATTTTCTCTCTTTCAACATTGCCTAACACGTTAGTCATGGGAATTCCTCTCTTAATCGCCATGTACGGCG ATTATTCTGGCAACCTCATGGTTCAGGTGGTGGTGCTCCAGTGTATTATATGGTACACGCTCCTATTGTTTCTTTTCGAGTACCGTGGCGCGAAGTTACT AATCATGGAACAGTTTCCAGAAACTGCAGCGTCGATCGTGTCTTTCAAGGTTGACTCTGACGTCGTTTCGCTTGACGGTAGGGATTTTCTTGAAACCGAT GCTGAGGTTGGCGACGACGGGAAACTTCACGTCACTGTTAGAAAATCAAACGCGTCGCGAAGATCGTTTATGATGACTCCACGGCCGTCGAATCTCACCG GAGCTGAGATTTACAGCATGAGCTCTTCACACAATCCTACGCCACGTGGCTCTAACTTCAACCACGGTGATTTCTACTCCATGATGGGGTATCAAGCAAG GCATTCGAATTTTGGTGCGACGGATTTGTATTCTGTTCAGTCCACGTCGCGTGGGCCCACACCACGGCCATCGAATTTTGAAGAGAACGGTGCAGCAATG GGTCAGAATATGAGTTCACCCAGGTTCGGGTTTTACCCAGCACAAACCATGCCGGCATCTTATCCAGTTCCAAATCCAGAATTCTCATCCAGTTTTAGTA AAAGTGTTAAAAACTCGCAACCACAAACACAACCGCAACCACAAGTAGTACAAAATAGTACTAAATCGAGTCATGACGCGAAAGAGCTCCACATGTTTGT GTGGAGCTCGAGTGCGTCACCAGTTTCGGAAGGTACTGGCCTCCACGTATTCAGCGGTGCCGATTTAGGAGCATCCGATCAAGGTGCTAAAGAGATAAGG ATGGTGGTAGCAGAAGAAAATCCTCAAACTGAAGCCAATAAAGGTAATAATGTACACGAGTTTTTCAAAATCAAAACAAATCTTGTTTAATGAATTAATA TGATTTGGTGATCGTGTGATGATTAATTCAAAACTGAAGTTATAACGGAAGCAGAGTTTGTTGCGGAAGAGTTGAAATTTCCCACGAATGAAACAGAACA CGCAGAGGAATTGGAAGGAGAGAAAGAAGGACCCAATGGACATAACAAGCTAGGTTCAAATTCAACGGCGGAGCTACACCCGAAAGCCGCTGCAGCCGCC GGGACTGGCATGACAAAATATATGCCTCCGGCGAGTGTTATGACCCGTCTCATACTCATCATGGTATGGAGAAAGCTTATCCGCAACCCCAACACATACT CAAGCCTCATTGGTGTCATTTGGTCCCTCGTTGCCTTTAGGTGGCATGTGCATATGCCCAAAATAATAGAGAAATCAATCTCCATATTGTCTGATGCAGG TCTTGGAATGGCTATGTTCAGCTTAGGTCTGTTTATGGCTCTTCAGCCAAAAATGATAGCTTGTGGGAACTCAGTTGCTACATTTGCCATGGCTGTTCGA TTCTTGACCGGTCCAGCCGTCATGGCAGCAGCTTCCATCGCTGTTGGCCTTCGTGGCAATCTCTTACGCATAGCCATTGTTCAGGCTGCACTTCCACAAG GAATTGTTCCATTTGTATTTGCAAAGGAGTACAATGTCCATCCAGCCATTCTTAGCACAGCGGTTATATTTGGGATGTTGATAGCACTACCAATTACTCT AGTCTACTACATACTACTTGGCTTGTAAATTTATACTATACAGTATTAAGTAGTAGACAAAGACAGGAGATTGAAGAATGATCCTTTTCAACCTTTTATT CTCTGAGTTAACATGCATGCACAGGGACCACATTGGATTGTGCTGTTATTAGCAAGGATGGGGATTTTCTGAATGATTTACAAACTACTAGTCTCCTTAA AACAGAGGGTATCCTACAAAGTTTCCAAATTTTGGGAAACGTAAGAAAATTTGACCTACTGGCCAAAATTCCTATGATCCTAATACCTATATTATTAAGT TCCAAGTGACACAATTCTCAAGAACCTCAGAGAAAGAGGAACAAGTACAGTGTATTGGAGACACGACAGAGAAAAGCAGGGTGAAGCTAACATAAACAGA GGCAATTGTACCTAGAAAAATTGGTTCCCTACGTATCTGCTTTGTAAATTTTATTAGTCGTGTCTGGGTCATGTTCAGCAATAGAAGATATTAAATTGGA ATATTGAAGGAAGGACTTTTTTCCTCTAAATCTTGTGTTTACTTTATACTTTTAAATTAATCATATTATTATTATTGGTGTATGTTCTGTCTTTTATCGT CCTCGGATCCAGCAATTATTTGCTTTTGTCGTCTTTTCTGGTTGGCATGATTTGAAGAGAAAACTATGTACAATAAATTGTTAAATTATCACTCTACAAT TATTATTATTATCGâBLAST |
Tissue | pods |
Gene name | LI_gene_153654; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525608
Blastp | Auxin efflux carrier component 4 from Arabidopsis with 88.76% of identity |
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Blastx | Auxin efflux carrier component 3 from Arabidopsis with 69.79% of identity |
Eggnog | auxin efflux carrier(ENOG410Y9XE) |
Kegg | Link to kegg annotations (AT2G01420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_017436535.1) |
Pfam | Membrane transport protein (PF03547.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |