Id Trinity | TRINITY_DN47565_c1_g1_i8 |
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Name Transcript | Ll_transcript_525601 |
Sequence | AAAGCCTTCAGCTTTTACTTCCTTGTCCGCTATTAAAATGCCATAAACTAAGCCTTCTTCATTCCCACCTTACCTTTTTCTCCTTTCTCTCCCTTCTCTC CCTCCCTCTCTCATCATCCAACTTTTAACACTTCAAAACATGAAACCTCTTTTGGTCTTTAACACCCTTCCCTTTTCCAACATCAATGCCTCCTAACTTC TAAACTCCTTCCTTTTCATAACTTTTATCCAAGTTCAAAAAGCAACCATAACTTGAACCAACTTTAGTTCCTTCAAATCACAGAAAGTGTTGTGTTTTTA TCAATAAACCAAAAAATGATTAGTCTTTTAGACTTGTATCATGTTCTCACTGCTGTTGTGCCACTCTATGTGGCCATGATCCTAGCATATGGCTCAGTGA AATGGTGGAAAATCTTCAGCCCTGATCAGTGTTCAGGGATAAACCGTTTTGTTGCACTCTTTGCAGTTCCATTACTGTCATTTCACTTCATCTCCACCAA CAACCCTTACGCCATGAACTTCAGATTCATCGCCGCCGATACGCTTCAGAAGATCATCATGCTTTTCGCACTTGCTATGTGGACTAACTTCACCGCCAAC GGTAGCCTCGAATGGATGATTACAATTTTCTCTCTTTCAACATTGCCTAACACGTTAGTCATGGGAATTCCTCTCTTAATCGCCATGTACGGCGATTATT CTGGCAACCTCATGGTTCAGGTGGTGGTGCTCCAGTGTATTATATGGTACACGCTCCTATTGTTTCTTTTCGAGTACCGTGGCGCGAAGTTACTAATCAT GGAACAGTTTCCAGAAACTGCAGCGTCGATCGTGTCTTTCAAGGTTGACTCTGACGTCGTTTCGCTTGACGGTAGGGATTTTCTTGAAACCGATGCTGAG GTTGGCGACGACGGGAAACTTCACGTCACTGTTAGAAAATCAAACGCGTCGCGAAGATCGTTTATGATGACTCCACGGCCGTCGAATCTCACCGGAGCTG AGATTTACAGCATGAGCTCTTCACACAATCCTACGCCACGTGGCTCTAACTTCAACCACGGTGATTTCTACTCCATGATGGGGTATCAAGCAAGGCATTC GAATTTTGGTGCGACGGATTTGTATTCTGTTCAGTCCACGTCGCGTGGGCCCACACCACGGCCATCGAATTTTGAAGAGAACGGTGCAGCAATGGGTCAG AATATGAGTTCACCCAGGTTCGGGTTTTACCCAGCACAAACCATGCCGGCATCTTATCCAGTTCCAAATCCAGAATTCTCATCCAGTTTTAGTAAAAGTG TTAAAAACTCGCAACCACAAACACAACCGCAACCACAAGTAGTACAAAATAGTACTAAATCGAGTCATGACGCGAAAGAGCTCCACATGTTTGTGTGGAG CTCGAGTGCGTCACCAGTTTCGGAAGGTACTGGCCTCCACGTATTCAGCGGTGCCGATTTAGGAGCATCCGATCAAGGTGCTAAAGAGATAAGGATGGTG GTAGCAGAAGAAAATCCTCAAACTGAAGCCAATAAAGTTATAACGGAAGCAGAGTTTGTTGCGGAAGAGTTGAAATTTCCCACGAATGAAACAGAACACG CAGAGGAATTGGAAGGAGAGAAAGAAGGACCCAATGGACATAACAAGCTAGGTTCAAATTCAACGGCGGAGCTACACCCGAAAGCCGCTGCAGCCGCCGG GACTGGCATGACAAAATATATGCCTCCGGCGAGTGTTATGACCCGTCTCATACTCATCATGGTATGGAGAAAGCTTATCCGCAACCCCAACACATACTCA AGCCTCATTGGTGTCATTTGGTCCCTCGTTGCCTTTAGGTGGCATGTGCATATGCCCAAAATAATAGAGAAATCAATCTCCATATTGTCTGATGCAGGTC TTGGAATGGCTATGTTCAGCTTAGGTCTGTTTATGGCTCTTCAGCCAAAAATGATAGCTTGTGGGAACTCAGTTGCTACATTTGCCATGGCTGTTCGATT CTTGACCGGCCCAGCAGTAATGGCGGCAGCTTCCATTGCTGTTGGCCTTCGTGGAAACCTCTTACGCCTAGCTATTGTTCAGGTAATTACAATTAACCAT AATTTCTATTCATGTTTGTGTTTAGAAAAAGAGAATTGTAGAGATTTTTAATGATTTGAAACCCACCAGTGAGTCTATAATTCTATAATAGCAGCATTTC TTTATTTATAACTTTAGTGATATTTCTGTGAGTGATTTTAGTTATCACACTAAACATGTAAGTCATTGTTGAAACTAGGCTGCACTTCCACAAGGAATTG TTCCATTTGTGTTTGCAAAGGAGTACAATGTTCATCCAGCCATTCTCAGCACTGGGTAAGCAATTTAGTCATTCTTTATCTTAAGAAATACTAAGCTGTT TCATTTTCTAAAATGTATGAATTTAATTTAATTGCAGGGTTATATTTGGGATGTTGATAGCACTACCAATCACTCTTGTCTACTACATACTACTTGGCTT GTAAAATTTCTACTATACTGAACGAATGACCCTTTTCAAGCTTTAATATTTGGGAGTTAACATGCATGCATGGAGACCACATTGGATTGTTTGTTCTGTT ATTGACAAGGATGAGCATTTTCTGGGTGAGAATCAGAAACTAGTATCCTATCAAAGTTTCCAAAATTTTGGGAATTTGACCTATTGGCCAAAATCCTCAT GATTCTAATACCCCTATTTTAAGTCCAAAGTGACACAATTTTCAAGAACAGAAAGGAACAAGTACAGTGTACAGAAGACATGGCAGGGGAAACCAGGGGA AAGTTAACATAAGCAGAGTCAATGATATCTAGAAATGGTTCCCTCAGTATTTTCATTGTAAATTTTATTATAGTCATGGTTGGGTCATCAAGTAACAAAG ACGGTTCAGCAATTGGGTAGAAGATATTAAATTGGAATATTAAAGGATGACTTTTTTATCTTTTAAAATCTAAATCTTCTGTTTACTTTATACTTCAATT AACTGTATTAATATTGATGTTCTGTCTTTTATCGTCCGCGGATCCGGCAATTATTTGCGTTTGTCGTCTTTCTTTATTTAACTAATATTATTAGATTTTT TATGAGTTAATCATGTAAAGATTTTTTTTTTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_153654; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525601
Blastp | Auxin efflux carrier component 3 from Arabidopsis with 72.82% of identity |
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Blastx | Auxin efflux carrier component 4 from Arabidopsis with 70.6% of identity |
Eggnog | auxin efflux carrier(ENOG410Y9XE) |
Kegg | Link to kegg annotations (AT1G70940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (NP_001316762.1) |
Pfam | Membrane transport protein (PF03547.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |