| Id Trinity | TRINITY_DN47567_c1_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_525674 |
| Sequence | AATTCTTTAGCCTCATGCGGGTGTGTCTCACCTAAAAGAAGTAAATGAGAAAGACAATGAAATATGAGGAAAAAGCGTCATACCTCTGAAAACTAAGAAT AATTAATAAAGCATTTAATTTGCAATTAATATTCAAAGGGCTTCTTCCTGTGTAAAGAAGAGCTCTGGAATAAATGCGGGAATTCTCCTGCAAGTTTCTG GTTTCTTTAAAGACATCAGCATTAACATGCTTTCAGATGAATACTTCTCTGAGGAGGAGTGTAAGGATTTGCATCAAAGAGTAAAAGATGGCTTGCTCAA GAAACCTATGATTGTTGATGTAGAGAAGATGGCAAGAGCATTGCATGAAGATATGACTAAGCATTGGCTTGCAAGAGAACTCACCATGATACAAAATCTT ATTGATCTTGCAAATGAAAAGGGATGGCGTAGAGAACTGTACGAATACCTCCAGAAAAGGGAGAAGCTTCAGAATCCCGTTGAACAAGAACGGTTATTGC ATGAAATTCCTCAAGCTATTGCAGAAGATCTAGAATCAGAATCGCCAACATCTGATGTTCCAGAAGATGGAGAATTAGAATCTCTAACACCTTATGTTTC AGATAAAAGAGTAGAAAACAATTCACGAGAGTTACGGAAGTCTGCTAGTAAGCAAGCATCTCTAGTGACTGAGGTTCCAAAAGCAGTTGAAGGTGGTTTT CTATGGAAGGCTACAAAACCTGATGTCCCGGGGGACCTAGAATTAGAATCTCAAATACCTGTTGTTCCAGATAAAGGAGTAAAAAACAATTTACAAGAGT TATGGAAGACTACTAGTAAAAAAGCACATTTAGTGAGTGAGGCTCCAAAAGCAGTTGCAGATGGTTTTCTATTGAAGGCTACAAAACTGGATATCGCTGA TCTTGTAAAGGAGGAAACAAATTCACCAAAGTCAACTTCTGGTCTCTATGCAGCATCAAAAGTTCCTCTTTTCAATATGGAAATGAATAGCACTGTGTTA AATGTCTTTTCTCGTGGCACTGCTGCAGTGCACCAATCATCCACAATGCCTCTTCAACAGCAGCCAGTGCAACATATAGACTTGAACGAAGATGTGTCTA ATGCAGATGAATCAAATGAAACGAAGATTTGCAAAGCATCGGAGGACAGACCGGTAAACCCATCTCAGCCCGATGTTAAACAGTTGAGTGATGATGATGA AGGTAAAAAATCGAAGACAACAATACAGGTTCCTGCTGAGGTGTTGGAATCCTTGATTTGGTATTATAGAGATCCACATGGTGCTGTACAAGGACCATTT TCCTTAACTTCTCTAAAACGTTGGAGTGATGGTAACTACTTTCCTCCAAATTTCATGGTTTGGAAGGATGGCCAAAGCCAATTTGAATCTGAACTGTTGG TGACAATTCTAAACCAATTTTTCCCTGTTGATCAAAGTGCAAATAATCAATTTTAGTTCATGTGAATAATTGTGTACGGTTCTTGGGCAACCACCAATTT GCAATTTACAATTGCAACAGTTAGAGGTTTAGATTGGTTGAAGAATGATGTGCAATGTTGCACTGCTCTAGAGAAGTTTAAGGTTGTCAAAGCTGTTCAT TGTGAAAAAGAAATAGTATGGTACTCATCTTTCAAGATAAAGTATATCTTACATGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_153660; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525674
| Blastp | Uncharacterized protein At5g08430 from Arabidopsis with 61.95% of identity |
|---|---|
| Blastx | Uncharacterized protein At5g08430 from Arabidopsis with 59.42% of identity |
| Eggnog | SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member(COG5531) |
| Kegg | Link to kegg annotations (AT5G08430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436831.1) |
| Pfam | GYF domain (PF02213.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |