Ll_transcript_525655

• Id Trinity: TRINITY_DN47567_c1_g2_i2
• Name Transcript: Ll_transcript_525655
• Sequence: ATTTTTGTTCAAAATTGGGGTTTCTTCTTCTTTTTCCCTTTGTATTGTGTTACGAACGCAACGCTTACTCTTCACTCTCTCTCTTGTGCTCTCTGACTCA GATACTCTCACTACTCCTAACCACTCATTCTTCTAGAACCTTCCACTTCTTCTCCTTCGTCAACGCCTTCAAGATGGATGATAAAGCTAGTGCTGATTCT TCTTCGGTAGAGACAATTAATGGGAAGGTTCAGAACCCTATTAAAAAGAAGAGGAAATACAAAAAACAGAAAAAGGAGTTTGATGGTTGGGGTTCGACGT CACTTATTCGGTTTCTCCAATCCATTGGTAGAGATACTAGCAATGTGATGAGTCAAAGTGAAGTCACCAATATCGTAAATGAGTATGTTAAACAGAATAA CCTTATTCATGCTACAAAAAAGAAGAGGATTATGTGTGACCAGAGGCTCCATTTGCTGTTTGGAAGGAAGAGCATTGGCCGGTTGAAAGTTGGCGACTTG CTCGAGCCACATTTTGTTGAGAACCGTGACAAATCTGATGATGATATTTTCTTTAATTCGGATGATGATGAGGAAGAGGAGGATGCCTTGCGGACATGTC AAACTCCAAAATCGGCAAATTCAGAGAGGAAGAGTCAGCCAAAGAAACTGGCTAGGGAAAAACCGAGGAGCTGTTTTGCTGCTATTGTTCCTTTCAATAT CAAGCTTGTTTATTTAAGGAAGAGTTTAGTTGAGGAACTTCTAAAGGACCCTGAAACTTTTGAGACTAAAGTAGTTGGAGGCTTCATAAGAATCAAGTGT GACCCCAATGACTACCTTCAGAAAAACTCGCACCAGCTTCTGCAGGTCACAGGTGTAAATAAGGGATCTGGAATAACTGGTGGAATTCTCCTGGAAATTT CTGGTTTCTTTAAAGACGTAAGCATTAAAATGCTTTCAGATGATAACTTCTCTGAGGAGGAGTGTAAGGATTTGCATCAAAGAGTAAAAGATGGCTTGGT CAAGAGGCCTATGATTGTTGATATAGAGCAGACGGCAAGAGCATTGCATGAAGATATGACTAAGCATTGGCTAGCAAGAGAACTCACTATGTTACAAAAT CTTATTGATCGAGCAAATGAAAAGGGTTGGCGTAGAGAATTGTATGAGTACCTTCAGAAAAGGGAGAAGCTTCAGAGTCCTGTTGAACAAGAACGGTTAT TGCATGAAATTCCTCAAGCTATTGCTGAAGATCTAGAATCAGAATCGCCCACACCTGATGTTCCAGAATACGAGGAATTAGAATCTCCAACACCTTGTGT TCCAGATAAAAGAGTAGAAGACAATTTACAAGAGTTACGGAAGTCTCCTCGGAAGCAAGCATCTTCAGTAACTGAGGTTCCAAAAGCAGTTGCAGATGTT TTTCTATGGAAGGCTACAGAACCTGATGTTCCAGAACATCAAGAATTAGAATCTCCGACACCTGATGTTTCGGATAAAAGAGTAAAAAACAATTTGCAGG AGTTATGGAGGACTACTAGTAAGCGAGCATCTGTAGTGACTGAGGTTCCAAAAGCAGTTGCAGATGTTTTTCTTTGGAAGGCTACAAAACCTGATGTTCC AGAAGATCTAGAATTAGAATCTCCGACACCTAATGTTCCGGATAAAAGAGTAGAAAACAATTTGCAGGAGCTATGGAAGACTACTAGTAAGCGAGCATCT TTAGTGACTGAGGTTCCCAAAGCAGTTGCAGATGTTTTTCTATGGAAGGCTACAAGACCTGATGTTTCAAAAGATCTAGAATCAGAATATCTGACACCTG ATGTTCCGGATAAAAGAGTAGAAAACAATTTGCAAGAGTTATGGAAGACTACTAGTAAGCGAGCATCTCTAGTGACTGAGGTTCCAAAAGCAGTTGCAGA TGTTTTTCTGTGGAAGGCTACAAAACCTAATGTTCCAGAAGATCTAAATTTAGAAACTCTGACACCTGATGTTCCAGATAAAAGAGTAGAAAACAATTTG CAGGAGTCACGGAAGACTACTAGTAACCAAATATCTTTAGTAAGCAAGGTTCCAAAAGCAGTTGCAGATGGTTTTCTATGGAAGGCTACAAAACTTGATA TTGCTGATCTTGTAAAAGAGGAAAACAATTCACCAAAATCAACTCTCGGTCCCCGTGGTGCATCAGAAGTTCCTCCTTTCACTATGGCAATGAAAAGCAC CATGTTAAATGTCATTTCTCGTGACACTGCTGCAGTGCAACAAACGTCTATTATGCCTTTTCAACAGAAGCCAAAGCAACAAATAGACTTGAATGTTGAT CTGTCAGATGCAGCAGAATCAAATGAAGTGGAGATCTCTCAAGGACTAGAGGGCAAGCCAGTAAAGCCATCTCAGCCGGAGGTTATAGAGTTGAGCGATG ATGATGATGATGAATATGAAGAAGATGAAGATGATGTTGAAGATGAAAAACTGAAGACAACAATGACGGTTCCTGCTGAGGTGGTGCAGTCCTTGATGTG GTATTATAGAGATCCACAGGGAACTGTACAAGGGCCATTTTCCTTAACTTCACTAAAACGTTGGAGCGAAGAAAACTACTTTCCTCCAAATTTCATGGTT TGGAAAGCTGGCCAAAGCCCATATGAAGCTGCACTGTTGGTGAACATTCTACACCAGTTTTTCCCAAGTTGATCGAATTGCAAATGGTTCATTTTAATTC ATGTCAATAACTGTGTATGATTCTTGGGCAACCACCAACTTGCATTTTACAATTGACAATTAGGAATTCATGCTCAATTGAATCATTTTTTTCTTTCTCC TTTTCTTTGTCCTCTTTTTATTATATGCCAAAATGAACCCTTTATGTTAAATCATTCATACTCCAAAGGTTAGATTTCTTGAAGAATACTGTTCAATGTT GCACTGTTTTAGACAAGGCCAAGACTGTCCAAGCATCTGGTCATTGTGCATGTTATAGTGGAACCGGTGTAGTGCCCTCTTACTATGGTCAAAGAATAAT CCTTTGAGGGGTTTTGCCATGATTGGTTTGATTTCTACAAAATTTACTAACATCTTTTTGACTATGAGAGCCCTAATTTCATAATTGTTGAGGGGTTTTG ATGATTAGTTATGAATCATTGTCATTTTGGGTCTTTTCTCCTGAAACAATGTCATTTTGGTGTGTGGGTGATGTAATTTGAGTGAGATGGTTACACGAAT TTAACAAAGTTCAACCGAGT
• Tissue: pods
• Gene name: LI_gene_153660;
• Additional information: details;

Expression of Ll_transcript_525655

FPKM

• PAB: 0.8
• PNAB: 9.9
• PS1: 10.5
• PS2: 10.6
• PS3: 12.5
• PW1: 6.1
• PW2: 6.2
• PW3: 6.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525655

• Blastp: Uncharacterized protein At5g08430 from Arabidopsis with 49.37% of identity
• Blastx: Uncharacterized protein At5g08430 from Arabidopsis with 50.67% of identity
• Eggnog: SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member(COG5531)
• Kegg: Link to kegg annotations (AT5G08430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443242.1)
• Pfam: SWIB/MDM2 domain (PF02201.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;