Id Trinity | TRINITY_DN47573_c2_g5_i2 |
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Name Transcript | Ll_transcript_526866 |
Sequence | TTTCATGGTCCACTAAGCTAAAACCATAAGCATTAAAAGCATAAATGGATAAGAATGACACCTAGATTTTCTTGCTATGGCAGGGGCTAGTTTCTACACC TCCTGTCTTTTCTCTCCAAGGTACCTTATCTTATGTTTGATGTTTCTCTAACATCATTAACTAGTTACTAGTTTTAAAGTAACAAATTCATATCTTGATG TTTCTGAACAATGAACATCCTAGACATTCATGTTTTGGTTTATAAGAAAAGCAAATTGTTAACAATGAGTTTTTCCTTTTTTGTTGATTACTATGAAGCA GTTGGTGACTCCAATGTACTACTCATGCCCTTAAATTTTCTTCTTTATGTCTATAGCATTGATAAGCAACTTAGGGACATCTTCTTCGGTATTAAAAACT CACAATGCAAGGGCCGCCGCGCCATGGAAACTACCGCAAAGGAGACGTTTCAGAATTAAAGCAGAAGTGGAGTATGTAAATGCTGAACAAGCGAAGGATC TCGTAGCAGTCGAAGGATACACAGTTCTTGATGTGCGGGATAGAATTCAGTTTGAGCGAGCTCATATAAAATCATCTTATCATGTGCCTCTTTTTATCGA AAACAAAGACAATGATCCTGGTACAATTTTAAAAAGGACTCTGCACAATAATTTTTCGGGGCTGTTCTACGGGTTACCCTTCACCAAGCCAAATCCTGAT TTTGTACAATCTGTTAAGAGCCAGTTTCAACCAGAAAGTAAAATCTTGGTTGTATGCCAAGAAGGACTGAGGTCTGCTGCAGCAGCAAGTAAATTAGAAC AAGCTGGTTTCTCAGATGTAAAAAGCATAACATCTGGCCTTCAAAAAGTGAAGTCAGGGACATTTGAATCTGTTGGCTCCACAGAGTTGCAGAATGCTGG CAAAGCTGGTTTGGTAACAATCCAAGGGAAAATCTCAGCTGTGTTGGGAACAGTTCTTATTTGTGCATATTTATTCATTACCTTCTTCCCTGACCAAGCA GAGAAGTTATTCCAATTAGTGCCTACAAGCTAAGCCAAAAAATTCATTTAATTGTAACCTTTCTTTTGTCTTTCATTATGCATGTAGCATAATTGAGCAA CATAGAAACATGACATGTAAAAGAAGAGATGGAAGAGTTAGTAATGTCATTAAGGCTACAGCGGTAAAAAAAAACAATTTGTTTTACATAGTGTAATAGC ATTTTCCATGAAGCAAGTAGAATATTTTGCTTTCTGTTATTTCCAAATATCAAGTAGAATATTTTGCTCTCAACTTATCTTTTTTGGGTTTAATAAAGTA TCTCCTCATTCTATGGC BLAST |
Tissue | pods |
Gene name | LI_gene_153737; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526866
Blastp | Rhodanese-like domain-containing protein 9, chloroplastic from Arabidopsis with 73.23% of identity |
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Blastx | Rhodanese-like domain-containing protein 9, chloroplastic from Arabidopsis with 73.23% of identity |
Eggnog | Rhodanese-like domain(ENOG4111KQZ) |
Kegg | Link to kegg annotations (AT2G42220) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417987.1) |
Pfam | Rhodanese-like domain (PF00581.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |