Ll_transcript_526854

• Id Trinity: TRINITY_DN47573_c2_g6_i3
• Name Transcript: Ll_transcript_526854
• Sequence: AAACGAGGGTCAAATTACTCTAAGATTCTTTTAAACTTACTCTTCGTTTAAGTCTAGATTCTAGATACATCTAAACCATCCAACCTTCACCCATTTTCAG CTGAGAAACTCAAATTAAAGACAAAAAAAAATCAAAGCACGGAACCCTAAAAACTTCTTCCATCTTCTGATTCTTCAACAGGGTACGTAACCTTCTTTCA TTCCATTCCTTTTCTACAAATAAAGTTTCAATTTTTTTCCTTTCCACAATATCTCTACCATTAAGGCCTTCCCCTTTTTAACTTTGTCTTTTACTGAAAA ATCGTGTTTTTCTCTCGCTTTGATATGGTTTATAGCTACCCAATCTAATTTATTTGGTGAGGTTTAGATGGTTAGTTTTGGTGGAGAATGGAAATGATAT ATCTTTGAAGCATGTTTGTATGGTTATTTAGGTATTTGATTAGATATCAAATGATATTTTCTACAGTTTTGCTTTCTCTGTTTTGTTCACTCTGTTGTGT ATGGGAAATTTAGCTAGTTAGCTATTAATTCCTGACGGTCTTTTAAATTGTGGTTGCAGTCGTGATTGCGGTCGCGGTTGTGGTTACTGTGATTGCGGTT ATTGCGATTGGATTGCAATCGGTGCGATGGTGTGAATTACTTTGTGAGTAAAAACATATTTTTGATATCGATGCGCTATGATGTGACCCGATGCGGTCCA AATGCGATTGTGTTGCGGCCTGTTGCGGTCGCGTCTCTGTGATTTGGTATCAAACCGCAATTGGTGTGATGCGGTTGCGGCAGTCACCGCAACCACAATA TTGCGGCCTATCACGTTATGTGGTCCGCAATTTAAAACACTATTTCTAATTCCAATATGTGTTTTGAAGAAGATTAAGAAACGAGGTGAGGAACATTTCT GGTTTTTGATTTTGCTACTAGTAATAGACAGAGGGTGAGTCTCAGAAGTTCAAATCCCTGGAACACCTTGTTTGCTTGTAGGAGTAAGAGTATGTTATTT AAAATTAATAGGTATAAATTATTGCATAGAATGTTACATCTTGGAATTTAAAGAGAACTAGATGTTTGTCGTAATACCGAAAGAATTCGATTAGATGGTA AAAGATGGAGAAATGTTGTTTCGGGAGTGGCTAATAGAGGTTGTTTGAAATTGAATGCTGTTTTAGCACAATTTCATATTTTTCTCACTTTTTTTGTAGT TGTAGTACTTCTAAGCATACTATAAAAACTTTTCAAGTTATAGTTATTTTGAAATTAGTGCTCAAATAATTTGTAGTCTTGTTAGACTTATATGTAGAGT GGAGGGTTGATTAGTGCATACTATAAAAACTTGTCAAGGTTGCTTTCCTTGTGACGTGAAAGTAATGGGTTGAAATCTTGGAAATGACATATCTGCTTGC GGAGTGAAACATTTAAATGAGTCGTCCACAGGATCCACCTCGATCATTCTTCCCTTTTGGAAGAAATCCTTTCTGGATGAGATCACCTAAAGGAACTAAC TTGTCGCCACAACTTCTGGCGATATTACATGCATTTGAGGCAACTTTGGAAGAGAGGTTGAAAAAGCTTATGCCGAAAAGCAAGGATGAAATCCTCTGCC TGTCTTGGATGACTTTGGCTATGCAATCACTTTGTGAGACTCATCATGACATCGAAAATCTCATAGCAAATCTCGAGCTACCTGTTGGTGATTGGGATGA GAAATGGATAGATCTGTACTTGGACATTAGTGTGAAGCTGCTAGATATATGCATTGCATTTAGTTCTGAGCTATCGCGGCTGAACCACAGTAATCTTTTA CTTCAGTGTGCTTTGCACAGTTTAAACTCTGCCTCTCCGAAGCAGTTTGTTCGGGCCTCTTCTTCTCTTGATGGTTGGAGGCAGCATATTGGTTCCAAGA ATCCTAGGATTGATAAATGTGGCGCCATTTTAGATAATCTTGTGGGATCACTTGATCTTCCAAAGGTTAAAAAGTCAGCCAAAGGGAAGGTTTTGATGCA GGCTATGTATGGAGTGAAACTGATGACTGTTTTTGTCTGCAATGTGTTTGCCGTGACCTTTTCTTGCTCCGCAAAGTTGTCGGATTTGGATGTGGCTGAC ATGTATTCCTGGGCTCCAGCTTTTAAACGTTTGCAG
• Tissue: pods
• Gene name: LI_gene_153738;
• Additional information: details;

Expression of Ll_transcript_526854

FPKM

• PAB: 7.2
• PNAB: 0.9
• PS1: 0.8
• PS2: 1.3
• PS3: 2.5
• PW1: 0.6
• PW2: 0.5
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_526854

• Blastp: Protein BPS1, chloroplastic from Arabidopsis with 58.51% of identity
• Blastx: Protein BPS1, chloroplastic from Arabidopsis with 58.51% of identity
• Eggnog: protein BPS1, chloroplastic-like(ENOG410YDX5)
• Kegg: Link to kegg annotations (AT1G01550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460245.1)
• Pfam: Protein BYPASS1-related (PF05633.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;