| Id Trinity | TRINITY_DN47573_c2_g6_i6 |
|---|---|
| Name Transcript | Ll_transcript_526879 |
| Sequence | AAACGAGGGTCAAATTACTCTAAGATTCTTTTAAACTTACTCTTCGTTTAAGTCTAGATTCTAGATACATCTAAACCATCCAACCTTCACCCATTTTCAG CTGAGAAACTCAAATTAAAGACAAAAAAAAATCAAAGCACGGAACCCTAAAAACTTCTTCCATCTTCTGATTCTTCAACAGGGTACGTAACCTTCTTTCA TTCCATTCCTTTTCTACAAATAAAGTTTCAATTTTTTTCCTTTCCACAATATCTCTACCATTAAGGCCTTCCCCTTTTTAACTTTGTCTTTTACTGAAAA ATCGTGTTTTTCTCTCGCTTTGATATGGTTTATAGCTACCCAATCTAATTTATTTGGTGAGGTTTAGATGGTTAGTTTTGGTGGAGAATGGAAATGATAT ATCTTTGAAGCATGTTTGTATGGTTATTTAGTCGTGATTGCGGTCGCGGTTGTGGTTACTGTGATTGCGGTTATTGCGATTGGATTGCAATCGGTGCGAT GGTGTGAATTACTTTGTGAGTAAAAACATATTTTTGATATCGATGCGCTATGATGTGACCCGATGCGGTCCAAATGCGATTGTGTTGCGGCCTGTTGCGG TCGCGTCTCTGTGATTTGGTATCAAACCGCAATTGGTGTGATGCGGTTGCGGCAGTCACCGCAACCACAATATTGCGGCCTATCACGTTATGTGGTCCGC AATTTAAAACACTATTTCTAATTCCAATATGTGTTTTGAAGAAGATTAAGAAACGAGGTGAGGAACATTTCTGGTTTTTGATTTTGCTACTAGTAATAGA CAGAGGGTGAGTCTCAGAAGTTCAAATCCCTGGAACACCTTGTTTGCTTGTAGGAGTAAGAGTATGTTATTTAAAATTAATAGGTATAAATTATTGCATA GAATGTTACATCTTGGAATTTAAAGAGAACTAGATGTTTGTCGTAATACCGAAAGAATTCGATTAGATGGTAAAAGATGGAGAAATGTTGTTTCGGGAGT GGCTAATAGAGGTTGTTTGAAATTGAATGCTGTTTTAGCACAATTTCATATTTTTCTCACTTTTTTTGTAGTTGTAGTACTTCTAAGCATACTATAAAAA CTTTTCAAGTTATAGTTATTTTGAAATTAGTGCTCAAATAATTTGTAGTCTTGTTAGACTTATATGTAGAGTGGAGGGTTGATTAGTGCATACTATAAAA ACTTGTCAAGGTTGCTTTCCTTGTGACGTGAAAGTAATGGGTTGAAATCTTGGAAATGACATATCTGCTTGCGGAGTGAAACATTTAAATGAGTCGTCCA CAGGATCCACCTCGATCATTCTTCCCTTTTGGAAGAAATCCTTTCTGGATGAGATCACCTAAAGGAACTAACTTGTCGCCACAACTTCTGGCGATATTAC ATGCATTTGAGGCAACTTTGGAAGAGAGGTTGAAAAAGCTTATGCCGAAAAGCAAGGATGAAATCCTCTGCCTGTCTTGGATGACTTTGGCTATGCAATC ACTTTGTGAGACTCATCATGACATCGAAAATCTCATAGCAAATCTCGAGCTACCTGTTGGTGATTGGGATGAGAAATGGATAGATCTGTACTTGGACATT AGTGTGAAGCTGCTAGATATATGCATTGCATTTAGTTCTGAGCTATCGCGGCTGAACCACAGTAATCTTTTACTTCAGTGTGCTTTGCACAGTTTAAACT CTGCCTCTCCGAAGCAGTTTGTTCGGGCCTCTTCTTCTCTTGATGGTTGGAGGCAGCATATTGGTTCCAAGAATCCTAGGATTGATAAATGTGGCGCCAT TTTAGATAATCTTGTGGGATCACTTGATCTTCCAAAGGTTAAAAAGTCAGCCAAAGGGAAGGTTTTGATGCAGGCTATGTATGGAGTGAAACTGATGACT GTTTTTGTCTGCAATGTGTTTGCCGTGACCTTTTCTTGCTCCGCAAAGTTGTCGGATTTGGATGTGGCTGACATGTATTCCTGGGCTCCAGCTTTTAAAC GTTTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153738; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526879
| Blastp | Protein BPS1, chloroplastic from Arabidopsis with 58.51% of identity |
|---|---|
| Blastx | Protein BPS1, chloroplastic from Arabidopsis with 58.51% of identity |
| Eggnog | protein BPS1, chloroplastic-like(ENOG410YDX5) |
| Kegg | Link to kegg annotations (AT1G01550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460245.1) |
| Pfam | Protein BYPASS1-related (PF05633.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |