Ll_transcript_526146

• Id Trinity: TRINITY_DN47576_c0_g1_i6
• Name Transcript: Ll_transcript_526146
• Sequence: CTATTAATGGAGAAACGGTACCTATATTTTCACTTATTTTAAATGATAAAATTGTAACTTTGAGGATTTATGCAACTTACATTCTGATTGTCGTTAATAT ATCGAATCATCATTCTTTGTCAAAAAGTTTCAATCTTTGGTCAAATTTCGTCAAACAGAGTATGATTCAGAGGGACCCATCTTCTTCTTCCACAGCACTC GAGCTTAAAGATCGGACCCACAGTGGAGACAGCATAGTGGACGTTCCTCCGTCGGAGCGGCGGTCGGAGCCGTTAATGCCGGTGATTTTTGACGTCGAGC GCCACTCCAGGCCATTCAAACGGTGGTTCCCTTGGCTGGTGCCGTCGTTTGTGGTGACTAACGTGGCATTGTTCGTTATCACTATGTATGTGAATAATTG CCCGAAGCATTCAATTCCCGGTTCTTGTTTTGCTCGTTTTCTTGGTAGATTCTCTTTTCAGCCCCTCAAACAGAACCCTCTCCTTGGTCCTTCTTCACTC ACATTAGGAAAGTTGGGTGCCCTGCAAATGCACAAAGTTGTTCATAAACATCAGGTTTGGCGGTTATTCTCTTGTATATGGCTGCACGGTGGGGTTATCC ATGTGCTTGCCAACATGTTTAGCCTTGTTCTTATTGGAATTCCTTTTGAGCAAGAATTTGGATTTGTTCGAATTGGACTTCTGTATGTCATATCTGGTTT TGGGGGGAGTTTATTGTCGTCTCTATTCATACATTCAGGTATCTCAGTAGGTGCTTCTGGTGCAATATTTGGCTTACTAGGAGCCATGCTATCGGAGCTC TTAACAAATTGGACAATATATGCTAATAAGTTTGCTGCATTGTCGACTCTTATTGCCATCATTATAATCAATTTAGCTGCTGGAATCCTTCCACATATGG ACAATTTTGCTCACATTGGAGGATTTATCTCTGGTTTCTTTCTTGGGTTTGTCTTTCTGATTCGCCCTCAGTATAAGTGGGTTAGCCAAACAAATTCTCA TTCTGGATTTGTTGCCCCTCCTGTGAATTCTAAGCACAAACCTTATCAGTATGTACTGTGGGTCATCTCCTTCATGCTACTTTGTGCTGGATTTATAACT GGGATGGTTTTGCTCCTCCGAGGAGTTAACTTGAATGATCGCTGCTCTTGGTGTCATTATTTAAGTTGTATTCCTACTACAAAATGGAGCTGCAAACCAT AACAAGTTTATTGTGAGGCAACCCAAATGGGGAACCAACTTAACATGACATGTTTGAGCAATGGGAAAAGTGGCACCTTTTCTGTATCAAATAGCATCCA TTCCCAGGCTCAACAGCTATGTTCTCAACTTTGCAGTTGATAGACACACAAATACAACATCACTTGGTGCATTACCATTCAACAAATTTATGTATATTAT TCAACAAATATAACTATCAAAGATTGGAAATGATGTGAAAGGACAAAATGGATTACATTATATCATTACTCGAGTATCTTGTTATGGGTTAGCTCTCTCT GTGTAAGCCTAATCCTGTGAATCTAAATTCTGATATCTCTATTTCTGGGGTCATTGTTATTAACCTCAAGCCCTTAGGTAAACGACACATAAACATGGTT TTGTATTTTTGACAGAACTCCTCACTCAAGAATGATTCCA
• Tissue: pods
• Gene name: LI_gene_153750;
• Additional information: details;

Expression of Ll_transcript_526146

FPKM

• PAB: 0
• PNAB: 1.2
• PS1: 1.3
• PS2: 0.5
• PS3: 0.8
• PW1: 1.2
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_526146

• Blastp: RHOMBOID-like protein 1 from Arabidopsis with 74.66% of identity
• Blastx: RHOMBOID-like protein 1 from Arabidopsis with 71.47% of identity
• Eggnog: rhomboid family(COG0705)
• Kegg: Link to kegg annotations (AT2G29050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454071.1)
• Pfam: Rhomboid family (PF01694.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;