| Id Trinity | TRINITY_DN47579_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_525184 |
| Sequence | CCCTACAACTGTTGAAGTAATTTAAGAGCAGTGCAGAGGTAAAGACGAAATTGTAGCAGTAACTACTAAAATCGCCACAGAATATTTTCATTCATCAAGA TATAGAAGAGATGGGTGCTCCTGACAGAAGAAGCAGAAATCAATCGACAGCTTTGGCACTCACTAAACACCTTTCATTGGATCCTAATGTTATTCCAGCT GGTAGTTTAGACGGTGATGTTAAGAATCTTTACTTCAACATCACGGCGGGGTCTGGAAATGGAGACAGTCACAATAATGAGGAGGTGTTGAAGTGGGTAG AATTTGCAGAAGCTTTCCCTGTAGCCCTTGAAGCATGCTTTGAGGATCTGCAGAAATTAAATGAGGAACTGGCTGGAAAGTCTGTGCTTTTTGGCAATGG ATTGAAACCCTCTCCAGCTGATGTTATAGTGTTTTCAGTGATTCATTCTTCCCTGATCAATTTTCCAGTTGCGAACAAGGAAAAACTGCCACATATATTG AGATGGGCAGATTACATCCAGGTACTACACTTAAGTGTGCGTATGTTCATAGCTGTATATGTATGAGCAACCACTTTACAGTGCAAGAAAGTTGTACATG TTATTCTCCTGTGATTGGTGATTATTCCACAGTAAATTTTTAGGCATATTCAGAACCTGTCAATTATAGTAATTTTTTTTACTGTGGTCCAGATGAAATG CGCTTTTTATTTTTATGCCATTTGTACATAAAATGGCAAAAATTGAAAGCTAATTATCTTTTGACGTACTACGTGAAGTACATCACTGCACCTTGATACT AAGAATTGGGTGATGCCTTCTTGTGATGATATAAGAAAATATAAAACATTATCGTTTCTGCAACACTTATTTAGTTTCACAATGGGCACCGTGAATATGT ACCTAAGTCCTGCTAGAATTTGTAGCAGGAGACTTATAGTAAATCATTTGATAATTGGGTACCCTTTTGTGTTTTTTCTTTGCTTTGCACCATAAATAGA AGTGTTTGCATTTTCACACTTCCAACTTCGTTCCAGAAGGGAGCTTAATAATCTAGGACATCAATGCTAGCCTTTGGAGTGGTTGCGGATTGCAATTCTT ACATATTCAAGCTTATTTCTTCACAATTATTTAAACTTTATGTAGATTAGCAAGTTGAATAAATATGCGCAAAATCTTTCAACATTCATTTGTAATATGC TCTGATTTGGTGCACTGTTGTGTACTTGTGTTGAGTTTTCATAAAAATAAGTTTATTTCAATTGCGCTCTTATCTTTGTGGCAAAATAATTCATTAATTG TTGTGATCATGTGCTATTCTTTCTTCAGCACAAGGAGAATTTTGTAGGTTTATTTGAAGAAATATTGTTGCAGAAACCTGAGTTTGAGCCTCCAGTGAGA CATCTATCCTTTATTACTTAGTGCTTTCTTTATAGACTTACCAAAGGTATTTCTCAAGGCATTTAGATGGAGTCAATTTTGACACATTGATTTTTCAACA TTTTTAGAAAATGTAGTAACGGTCATCCTTGGATATATGTGTATGTAACCTTTTCATTTTTTTATTCCAAATGTTCATTATTGAACTGAGTATCAAGTAA TTGGAAAGGTTATTTTTCGACCTATCCGGATAACAATCATTTATATTTTTTAAGACTTAACATGTAACTTAACTGGCAAGAGTATCTTAATTTTCTTCAT GACGATAACAATACAGAAACCACGAAGCTTGTATAAAATTTTATATTTGCTTGACTTGAATTATGCAATATAATCCAACTTGGTGCTAAGTTCCTGAAGT ATATATAGCCTTTGTCTTTTGGTTTGCAAATGCTACTGGCTACAGTTATAAGATCTGAAACAGTGTAAACAGAAAACCTGGAATCTTCACTTCAACTTAG GCCTTTGCTTTATAGGAGAATGAGAGTATTGTGAAAGCCATTCTGTGTCAGTTAATAACTTGTCTTCAGAAGTTCTGTTATGCACCCTAAGGCATGCATA TGGAGATTTGTGAAGTCTATTTGTTCAGAGTCTTTTTTTTTCTTCATTTTCTTTGCAGGTAACAAAATCTGTTGGAGCTGTGGAATCTGACTTCAAATCA AACAAGACTGAACAAAGCATAAAGAGTGCAAGCAAGTCAGAAGAAGACATTAGCAAGGATAAAAACAAAGCTGAGAACATCAAGGGAAAGTCAACAGGAG ATAAAGAACCTGATAAGGCCAAAGCAAAACCTGCTGACAAAGAATCTAACAAAGGGAAGGCGAAACCTGCTGAAAAAGTGGCCGACAAAGACAACGAAGT TAGTGTCAGTTTGCTTAACATTCAGGTTGGATTAATTCGCAAAGCATGGAAGCACCCATCTGCAGATAGTTTGCTCGTTGAGGAGATAGATGTTGGAGAA GCCAAATTGCGGCAGGTTGTCAGTGGGTTGGCAAAGTACTGCAGTCCTGATGAATTGACGAATCGTCGTGTTGCACTTATTACAAATGTCAAACCAGGAA AACTTCGGGATGTGGTGTCTGAAGGACTGGTCTTATGTGCTTCTAATGAAGGTCCTACCATTGTGGAGCCCTTGCTCCCTCCAGAAGGATCTAAAATCGG GGAGCGCATTTCATTTTCAGGGGTTGATGGAAAGCCAGAAGATGTACTTAACCCGAAAAAGAAACAGTTGGAGAAGATTACACCGCATCTTTTCACTGAT GACAAGGGTGTAGCCACATTCAAGGGAATACCATTTATGACCTCTGGTGGACCTTGTACATCATCAATTCCCAGAGCAACTATTAAATGAAGATATGGCA GATCTATCCACTCAGATTGTTGGTACCATAAAATATTTAAAGTTTTGAACGTGAACAAAATTAACTATGGTTTGTAAGTTTTATGTTGTAGTTAAGGTTT GGTGGTGTTAATTTCTGGAAGTGTAATTTTGAATCCAATGACTCGAGTTAATAATGACTCGAGTTAATACTGTGATAACTCTCTTTAATGTAACACGTGA TTTTGACACGCGACCCATTTCTATGAATTTATTGAGCATGTCATCCTTTAAGGTTAAATACTAATGTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_153768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525184
| Blastp | - |
|---|---|
| Blastx | Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 48.9% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002140) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416880.1) |
| Pfam | - |
| Rfam | - |
| GO | - |