| Id Trinity | TRINITY_DN47579_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_525197 |
| Sequence | AAAAAACCTAAAACCCTGCAAATATCGAAGTAATAATTTAGGGGAATTCGTAGTTGAAGATGGGTGCCCCTGATAGCAGAAACCGAAATGAATCACTACT TTTGGCCCTCACCAAACACCTTTCATTGGATTCTAGTGTTATTCCAGCTGGCAGTTTAGATGGTGATGTTAAGAGTCTTTACTTAAGCATAGCAGCGGCA TCTGGAAATGAGGACAGTCACAGTAGTGACGAGGTGTTGAAGTGGGTAGCATTTGCAGAAGCTTTCCCTGAAGCCCTTGAGGCACGCTTTGAGGATCTGA AGAAATTAAATGATGAACTGTCTGGAAAGTCTGTGCTCCTGGGAAATGGATTGAAACCCTCTGAAGCTGATGTTATAGTGTTTTCAGTGATTCATTCTTC CTTGATCAACCTTTCAGATGCGAACAAGGAAAAACTGCCACATGTATTTAGATGGGCAGATTACATCCAGCACAAGGAAAAATTTGTAGGTTTATTTGAA GAAATATTGTTGCATAAGCCTGAATTTGAGCCTCCGGTAACAAAACCTGCTGGAGCTGTGGAAGCTGATTTAAAATCAAACAAGGCTGATCAAAGCATAA AAAATGAAAACAAGTCAGAAGCAGACATAAGTAAGGATAAAAACAAAGCTGAGAACATTAAGGGAAAGTCAGCAGGAGACAGAGAACCTGACAAAGCTAA AGCAAAATCTGCGGTCAAAGAACCTAGCAAAGGGAAGGCAAAACCTGCGGAAAAAGTGCCTGACAAAGATGCTGAACTTAGTGTCAGTTTGCTTAATATT CAAGTTGGGTTAATTCGCAAAGCATCAAAGCATCCATCTGCAGATAGGTCCTCTGGCAGACTTACTGGAAAGACCTTTTTAATTCAACAGAATGTTAAAT TGAGAAATATAGTTGATGCTTATGTAAGTTGATATGTTTACATCAATTTTAATATCAACAAACTTAAATGATGCAGTTTGCTAGTTGAGGAGATAGATGT TGGAGAAGCCAAATTGCGGCAGGTTGTCAGTGGGTTGGCAAAGTACTGCAGTCCTGATGAATTGACGAATCGTCGTGTTGCACTTATTACAAATGTCAAA CCAGGAAAACTTCGGGATGTGGTGTCTGAAGGACTGGTATTTGTTTTATTTTATAGTGTTTGTACTTGTTTCATAAGTTATATTGCCTTGCAGTCTTTAT TTGGTGATGGTTAAGTAATCTCAAGGGTTGTGAACATATATTTAGCTCCTCTGTCCAGGTCTTATGTGCTTCTAATGAAGGTCCTACCATTGTGGAGCCC TTGCTCCCTCCAGAAGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_153768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525197
| Blastp | tRNA-aminoacylation cofactor arc1 from Schizosaccharomyces with 28.22% of identity |
|---|---|
| Blastx | Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 31.95% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPAC30C2.04) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415725.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |