Ll_transcript_525199

• Id Trinity: TRINITY_DN47579_c0_g2_i7
• Name Transcript: Ll_transcript_525199
• Sequence: CCCTACAACTGTTGAAGTAATTTAAGAGCAGTGCAGAGGTAAAGACGAAATTGTAGCAGTAACTACTAAAATCGCCACAGAATATTTTCATTCATCAAGA TATAGAAGAGATGGGTGCTCCTGACAGAAGAAGCAGAAATCAATCGACAGCTTTGGCACTCACTAAACACCTTTCATTGGATCCTAATGTTATTCCAGCT GGTAGTTTAGACGGTGATGTTAAGAATCTTTACTTCAACATCACGGCGGGGTCTGGAAATGGAGACAGTCACAATAATGAGGAGGTGTTGAAGTGGGTAG AATTTGCAGAAGCTTTCCCTGTAGCCCTTGAAGCATGCTTTGAGGATCTGCAGAAATTAAATGAGGAACTGGCTGGAAAGTCTGTGCTTTTTGGCAATGG ATTGAAACCCTCTCCAGCTGATGTTATAGTGTTTTCAGTGATTCATTCTTCCCTGATCAATTTTCCAGTTGCGAACAAGGAAAAACTGCCACATATATTG AGATGGGCAGATTACATCCAGCACAAGGAGAATTTTGTAGGTTTATTTGAAGAAATATTGTTGCAGAAACCTGAGTTTGAGCCTCCAGTAACAAAATCTG TTGGAGCTGTGGAATCTGACTTCAAATCAAACAAGACTGAACAAAGCATAAAGAGTGCAAGCAAGTCAGAAGAAGACATTAGCAAGGATAAAAACAAAGC TGAGAACATCAAGGGAAAGTCAACAGGAGATAAAGAACCTGATAAGGCCAAAGCAAAACCTGCTGACAAAGAATCTAACAAAGGGAAGGCGAAACCTGCT GAAAAAGTGGCCGACAAAGACAACGAAGTTAGTGTCAGTTTGCTTAACATTCAGGTTGGATTAATTCGCAAAGCATGGAAGCACCCATCTGCAGATAGTT TGCTCGTTGAGGAGATAGATGTTGGAGAAGCCAAATTGCGGCAGGTTGTCAGTGGGTTGGCAAAGTACTGCAGTCCTGATGAATTGACGAATCGTCGTGT TGCACTTATTACAAATGTCAAACCAGGAAAACTTCGGGATGTGGTGTCTGAAGGACTGGTCTTATGTGCTTCTAATGAAGGTCCTACCATTGTGGAGCCC TTGCTCCCTCCAGAAGGATCTAAAATCGGGGAGCGCATTTCATTTTCAGGGGTTGATGGAAAGCCAGAAGATGTACTTAACCCGAAAAAGAAACAGTTGG AGAAGATTACACCGCATCTTTTCACTGATGACAAGGGTGTAGCCACATTCAAGGGAATACC
• Tissue: pods
• Gene name: LI_gene_153768;
• Additional information: details;

Expression of Ll_transcript_525199

FPKM

• PAB: 3.7
• PNAB: 23.6
• PS1: 19.8
• PS2: 13.5
• PS3: 15.6
• PW1: 15.5
• PW2: 15.3
• PW3: 16.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525199

• Blastp: Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 38.75% of identity
• Blastx: Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 48.15% of identity
• Eggnog: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity)(COG0073)
• Kegg: Link to kegg annotations (AT4G13780)
• CantataDB: Link to cantataDB annotations (CNT0002140)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416880.1)
• Pfam: Putative tRNA binding domain (PF01588.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;