| Id Trinity | TRINITY_DN47579_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_525200 |
| Sequence | AAAAAACCTAAAACCCTGCAAATATCGAAGTAATAATTTAGGGGAATTCGTAGTTGAAGATGGGTGCCCCTGATAGCAGAAACCGAAATGAATCACTACT TTTGGCCCTCACCAAACACCTTTCATTGGATTCTAGTGTTATTCCAGCTGGCAGTTTAGATGGTGATGTTAAGAGTCTTTACTTAAGCATAGCAGCGGCA TCTGGAAATGAGGACAGTCACAGTAGTGACGAGGTGTTGAAGTGGGTAGCATTTGCAGAAGCTTTCCCTGAAGCCCTTGAGGCACGCTTTGAGGATCTGA AGAAATTAAATGATGAACTGTCTGGAAAGTCTGTGCTCCTGGGAAATGGATTGAAACCCTCTGAAGCTGATGTTATAGTGTTTTCAGTGATTCATTCTTC CTTGATCAACCTTTCAGATGCGAACAAGGAAAAACTGCCACATGTATTTAGATGGGCAGATTACATCCAGCACAAGGAAAAATTTGTAGGTTTATTTGAA GAAATATTGTTGCATAAGCCTGAATTTGAGCCTCCGGTAACAAAACCTGCTGGAGCTGTGGAAGCTGATTTAAAATCAAACAAGGCTGATCAAAGCATAA AAAATGAAAACAAGTCAGAAGCAGACATAAGTAAGGATAAAAACAAAGCTGAGGTAAGTCAGCCTCTTTCTTTTTCACAATGACCAGTGATAATTTAACT CACAGTATACTATTTTTGCAACCACAGTAACCTCGATATGAAATATAATGCGTAGGCTATGATCTATGGTAATGACAAAAATCTTTATCTGGATAAAAAA ATTGTAGGCTAGTTAGTATTGTACATTTTGGATAGATAGGTGTTCTATGTACATCCATCTTAATCCAGATGTATAAAAATTCTTATATTTGAGAACAGGA CATCTTATTTCAAATTTGATAATTGACACATTAATTTGATCAACAAAAAGGACTGACTTTGTAAGAACAGTAAATTGATTTTAAATACTAATTTAGTTAT AGGCTGATGATTGCTGATGTAGAAGGTTGGAAGTGCTGGTAAGCAGTATCTTCATTTACGATATGAATTTCTGAGAGACGATATTATCCATGTAGAGGTT ATGTTACTATAGACATAGAGGACATGGTGTTACAAGTGCCGATATGTGTTACAAACTCCTTGCACTTTGTAAATGCATCTTAGTACAGTTCCTTTACTCT GATGTTGCATTCCGTTTATTTTAGAACATTAAGGGAAAGTCAGCAGGAGACAGAGAACCTGACAAAGCTAAAGCAAAATCTGCGGTCAAAGAACCTAGCA AAGGGAAGGCAAAACCTGCGGAAAAAGTGCCTGACAAAGATGCTGAACTTAGTGTCAGTTTGCTTAATATTCAAGTTGGGTTAATTCGCAAAGCATCAAA GCATCCATCTGCAGATAGTTTGCTAGTTGAGGAGATAGATGTTGGAGAAGCCAAATTGCGGCAGGTTGTCAGTGGTTTGGCAAAGTACTGCAATCCTGAT GAGTTGACGAACCGTCGTGTTGTACTTATTACAAATGTCAAACCTGGAAAACTACGGGATGTGGTGTCTGAAGGACTGGTATTTGTTTTATTTTATCATG CTTGTACTTGTGTCACAAGTTATATTGTTTTTCTGTTTTTATCCAGTGATGATAAAGTAATCTCAAGGACTGTGAACATGTATTTGGCTCCTGTCCAGGT CTTATGCGCTTCTAATGAAGGTTCTACCATTGTGGAGCCCTTGCTCCCTCCAGAAGGAGCAAAAATCGGGGAGCGCATTTCTTTTTCTGGGTAAGCTGTT CAGAACATCTCAGATCAGAGAGTGAGACACATATATGATATATCTTTACTCGAGTGACTTGCTTAATCCTCTGGATAATATTCAAAGTGAATATCACTAT TTCATCCTAGGCCCCATTTGTTTAATTTGTTTTCATAAAAAGTGATTATTTTGATAAAAAAGTAACTTCTGAACTTGCACATTTGCTTGATTGAGCTTTT ACAAAAAAAATTAGAAGCTGAAAAACCTATACTTTCCAGTTTCTCTAAAAATGACCTTTTGTAGAATCATTTTTATAAGGCTAAACAAAACAGGCCCTAA TGTCTTACTGGTAGGTGGGATGTGCATATTTAGTCTTTAGTCCGAGTGTACTAAACTTGGTTACTTCCATTCTGACTTTTATTTATATTCATAGGGGATT CCCTCTCTTGGTGTCGAAGAGTCAGCTAAGTTGGTAGAGACATAAAGCGTGAGCTCCTTTGTTCAAACCATCACAACTATACAATTTCCCCCCTCCCATA AAAAACTTTACCCTAAAAAACATAAAAAATTAGCCACTTAAAATTAGAAGTGTAAATAACATTATTTTAATCGTTTAAATATTTAAAGATAAAGGCAATG AAGGTTAGTCTAGTCGGTAAGAAATTGGCTCAAAGCTCGCAAGGTCGTGAGCTCAAAGTCTGCTGCCAATGCAAGGACCTCATTGGTGGGTAATATGTAA GCGTTCATAAACCTGCAAGGCCTGCCCTGACCCTAGTGAAATCTCGGACCTAACTCACTTAAAAATTTTATTATGCGAAAAAAAGATTTAAAGATGAATA TAAAAAAAATAAGATTATAACTACATAGAAACTAGGAGATGGGTATAAAATTAGATTTTAGGATTAAAGATGAATATAAAAAAAGATAAGATTATAACTA CATAGAAACTAGGAAATGGGTATAAATTTGATTTTAGGAGGACACTTGTGTTGGCAATGCCCCCCTATCTCATCAGTCTATCCTCTTTTTTTACTATCTA ATGTTCACAAATCTCCTGAGACTTTTCCAGTTTACATGAGATTCTGTACGATCCTGGACTTTTTTAGAAATCCATATGACAGAGAAACTATTGAACTGTA GTTCCTTTTTGCCTTGCATAAATCTGTTTCCTTTTCTAGTCCTGATATCAGAATTTGGAGTCTCGGTTCTGCCTGTCTTTTTTCTTGCCAATCTTTCAGT TTCTCACATGTTTTCCGTTTTATCCACAAGGAATAGATTTGCCTTGGACAAGTTAATAGATCAAACCTTTTTTTGTTAAGGCATCTTTACTCATGGGTTT AACCATAGTTATTGCAGGTTAAATGGCCGCTAATAGCTTTTCTCCTGATTTGTTTTTTCTGAAATTGTGCATTTATTTCTTCATTGTCTGGAAAGTGTTG ATCAGATTTTAGCTTGTAGCACTGTCTAAATTGTGCATTGGATATAATTTTGCTTGAGATAATAAATTTCAGTTATATTCTGTCATTTGTCCAATTTAGG ATTGATGGAAAACCAGAAGATGTACTTAACCCAAAAAAGAAACAGCTGGAGAAGATTACACCGAATCTTTTCACTGATGAAAATGGTGTAGCCACATTCA AGGGAATACCGTTTATGACATCTAGTGGACCATGTACATCATCCATTCCCAAAGCAACTATTAAATGATGAAGATATGGCAGATCCATCCACTCAGATTG TTAGTACCACCAAATATTTGAAGTTTTGAACTATGATCAAATGTACTATGGTCTGCAAGTTTATGTTGCTGTGACATTTTGGTGTTAATTACTGGAACTA GATTATAATTTTGAATCCAATGACTTGAGTTTATACTATGATAACTCTACATTGTTAGAAGAATGAAGACTTTGAGTTTTAAAACCAGCCGGTATTTTAA ATTTCAGTTGATTGGGTTACCGATGGAAAAGGAATTTATTGTGGTTTAATGTGATTGTGTTTTAGTTGAATCATTATAATTTAATGTCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_153768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525200
| Blastp | - |
|---|---|
| Blastx | Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 38.1% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002140) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415725.1) |
| Pfam | - |
| Rfam | - |
| GO | - |