Ll_transcript_525203

• Id Trinity: TRINITY_DN47579_c0_g2_i9
• Name Transcript: Ll_transcript_525203
• Sequence: AAAAAACCTAAAACCCTGCAAATATCGAAGTAATAATTTAGGGGAATTCGTAGTTGAAGATGGGTGCCCCTGATAGCAGAAACCGAAATGAATCACTACT TTTGGCCCTCACCAAACACCTTTCATTGGATTCTAGTGTTATTCCAGCTGGCAGTTTAGATGGTGATGTTAAGAGTCTTTACTTAAGCATAGCAGCGGCA TCTGGAAATGAGGACAGTCACAGTAGTGACGAGGTGTTGAAGTGGGTAGCATTTGCAGAAGCTTTCCCTGAAGCCCTTGAGGCACGCTTTGAGGATCTGA AGAAATTAAATGATGAACTGTCTGGAAAGTCTGTGCTCCTGGGAAATGGATTGAAACCCTCTGAAGCTGATGTTATAGTGTTTTCAGTGATTCATTCTTC CTTGATCAACCTTTCAGATGCGAACAAGGAAAAACTGCCACATGTATTTAGATGGGCAGATTACATCCAGCACAAGGAAAAATTTGTAGGTTTATTTGAA GAAATATTGTTGCATAAGCCTGAATTTGAGCCTCCGGTAACAAAACCTGCTGGAGCTGTGGAAGCTGATTTAAAATCAAACAAGGCTGATCAAAGCATAA AAAATGAAAACAAGTCAGAAGCAGACATAAGTAAGGATAAAAACAAAGCTGAGAACATTAAGGGAAAGTCAGCAGGAGACAGAGAACCTGACAAAGCTAA AGCAAAATCTGCGGTCAAAGAACCTAGCAAAGGGAAGGCAAAACCTGCGGAAAAAGTGCCTGACAAAGATGCTGAACTTAGTGTCAGTTTGCTTAATATT CAAGTTGGGTTAATTCGCAAAGCATCAAAGCATCCATCTGCAGATAGTTTGCTAGTTGAGGAGATAGATGTTGGAGAAGCCAAATTGCGGCAGGTTGTCA GTGGTTTGGCAAAGTACTGCAATCCTGATGAGTTGACGAACCGTCGTGTTGTACTTATTACAAATGTCAAACCTGGAAAACTACGGGATGTGGTGTCTGA AGGACTGGTCTTATGCGCTTCTAATGAAGGTTCTACCATTGTGGAGCCCTTGCTCCCTCCAGAAGGAGCAAAAATCGGGGAGCGCATTTCTTTTTCTGGG ATTGATGGAAAACCAGAAGATGTACTTAACCCAAAAAAGAAACAGCTGGAGAAGATTACACCGAATCTTTTCACTGATGAAAATGGTGTAGCCACATTCA AGGGAATACCGTTTATGACATCTAGTGGACCATGTACATCATCCATTCCCAAAGCAACTATTAAATGATGAAGATATGGCAGATCCATCCACTCAGATTG TTAGTACCACCAAATATTTGAAGTTTTGAACTATGATCAAATGTACTATGGTCTGCAAGTTTATGTTGCTGTGACATTTTGGTGTTAATTACTGGAACTA GATTATAATTTTGAATCCAATGACTTGAGTTTATACTATGATAACTCTACATTGTTAGAAGAATGAAGACTTTGAGTTTTAAAACCAGCCGGTATTTTAA ATTTCAGTTGATTGGGTTACCGATGGAAAAGGAATTTATTGTGGTTTAATGTGATTGTGTTTTAGTTGAATCATTATAATTTAATGTCAAAA
• Tissue: pods
• Gene name: LI_gene_153768;
• Additional information: details;

Expression of Ll_transcript_525203

FPKM

• PAB: 1.7
• PNAB: 37.6
• PS1: 39.1
• PS2: 28.9
• PS3: 33.5
• PW1: 34.5
• PW2: 27.3
• PW3: 22.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525203

• Blastp: Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 50.54% of identity
• Blastx: Methionine--tRNA ligase, cytoplasmic from Arabidopsis with 45.75% of identity
• Eggnog: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity)(COG0073)
• Kegg: Link to kegg annotations (AT4G13780)
• CantataDB: Link to cantataDB annotations (CNT0002140)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415725.1)
• Pfam: Putative tRNA binding domain (PF01588.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;