Ll_transcript_525146

• Id Trinity: TRINITY_DN47597_c2_g1_i1
• Name Transcript: Ll_transcript_525146
• Sequence: AATACTTGTGGGTAGAAGAAAAAAAATCATATTTTAAGCAAACCCCACAACCATGAGTATCATGATTGCATTACCATTCCCACCCCATGAAGCCTTCTCT ATGTCTCTTAAAAACATCATTCACCTATATAGCTTTCTCATAGATCTCTATCACAACCCACTTAAAAGAAGAAATCCCTCAAATCCTTCAAACCCATGGT AATAGCATAGCTGGCAGGCAAATGAGGAAACCTGATCTGATGGTAGGAAAAGACAAAATGAACAACAACAACATTAAGATCAACAGCAACAACATTAAGA TCAAACTAAGGAAGGGTTTGTGGTCACCTGAGGAAGATGAGAAGCTGCTAAGGTACATGATAAGTAAGGGACAAGGATGTTGGAGTGACATTGCTAGGAA TGCTGGTCTCCAGAGGTGTGGTAAAAGTTGTCGTCTTCGTTGGATTAATTACTTAAGACCTGATCTTAAGAGAGGTGCATTTTCACCCCAAGAGGAAGAC CTCATCATTCATTTGCACTCCATTCTTGGCAATAGATGGTCTCAAATTGCGGCACGTCTCCCAGGACGTACAGACAATGAGATCAAGAATTTTTGGAACT CCACAATAAAGAAAAGATTGAAAACTGATAACAAGAGTGACTCATCAGAACATAGAGATCATGTTTTGGGTTGTGAGAATGGGATCATGCCCATTAATGA ACTCATGACCATGTACATGGATTCATCTTCTACAACTTCATCCTCCATGCAATCCATGCATGCTATGGTTTTAAGTCATGATCAGTTTGACCCATTTCCC ATGTTGACAAATCCTTATGATATGAGTTCATGCTTAGCCAAAGTTGAGATGGTAGATGGGCTTCATGGTGATTATGGAATATTGGAGAGTAATAAAATGG GGTTAGAAAGCGACCTTTCCCTTCCTTCACTAGAAAGTAGAAGCATTGAAAATGAAAACAATAGTGTCCCTATTGATGTGAAAAGCCATAACAACCACTT CAATAATACTTGCTTCAATAACACTGAACAGATTCAGAATTCAAACGTAGAGGAACTGTTTGGGTTTGGAAACCATGGGCAAGGGGAAAACTTAAGAATG GGAGAATGGGACTTGGAAAGTTTGATGCAAGACATATCCTATTTTCCATCCTCTGATTTCCAATTTTAAGTGTGCATGCATGAGTCCATAATAGGAGTTT CCATCCACCTCTATCTATCCCTATTTTCCTCTCACGAAATTACATGATATCCCTTAAGTTTAATTTGATTTAATTACACTCTTCACTCCTTATTTTAAAA GCTACCATCTTCTTTTTTGAGATCCAATTATTATTATTACACTTATCTCCCTTAAAAGGAGAGATATTTGTTATTATATAGATGTGTCTCCTTAAAAGAA ATAAGGGTAGTTTATGAAAAAAGAGTTTTGAGTATATAATTAAACTAAACCTCAAAGATACTTGATTTAATTTCTCATTTCTTTTGTTATTCACCTCCAT TCCCGTTCCTCCCCTTTTCTGCACTTAAAATACAAGGCAAGCCAAAAACCTAACCATATCAAGTTTTGGGCACACATTTTTCCAATATTCAGTTCCTCCA AAATATAAACCCATTTGTCTGTTTATACATTATCTTGTTACTATATTTACAAAATTGTAAACAAATACTAGTCAAGCTTGTGTTAGATATAGTTCTGCAG TTAAAATTGCAGTCTTGTGTATAGGGATGGCATGGGATTTGTTGTTTTGTTTGTGCCCCTAGTGGTTTCCCCGTGAAGCAGTTGTTCAATTTTTAGGAAT AGGTTGGTGCAATAAGGTTCTTATCATCACGAGAGATGTGAATAGTGGTCATTTAGAGAATAAAACTTAGTTGAAATTGTATGTAGCATTGTGTATAAGA CAAGGAATAATGTTTTTGTGGATGTTGTTATTTAGTTGTTGGTATTACATGTATAAGATTATGTAAAAACATTAATAAATATCATCTTTTATTTGGATAT ATGGTCAATACCTTGCTGTGATATGAGCAAGGAGCCAAGGATATGTGCTTTAAAGGGTTAAAGTAATTTATTTTGATCTTAGATTGCTGGGTATAGTTAT TGAA
• Tissue: pods
• Gene name: LI_gene_153903;
• Additional information: details;

Expression of Ll_transcript_525146

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.6
• PW2: 2.2
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_525146

• Blastp: Transcription factor MYB83 from Arabidopsis with 46.72% of identity
• Blastx: Transcription factor MYB83 from Arabidopsis with 79.1% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT3G08500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424980.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;