Ll_transcript_360304

• Id Trinity: TRINITY_DN47600_c1_g1_i5
• Name Transcript: Ll_transcript_360304
• Sequence: GAAATTAAGAACACAAAATTTGTTGGTACGATGATAATGTTGGAAAATAACAACATAACACGCCCACCTTTCAATTCCAATCCAATATGATGATATAACA TTCTTTCACTCCTCACTCACTCATTTCTCTCATTCACTCACTATTTCTCTCATTCACTCACAACTATCCTATTACCTTTTAGCACTTACCCCAAGAATGA GATATTCTGTAATCCTTGGTTCTTCCATTGTTACTCCTCCAAATCCATCTTCTTCTTCTTCTTCTTCATCTTCATCATCTTCTTCCTCTTCTACTCCTTC TTCTCATAACCGCCACTTCACAAAGCCTCACTATTCTTCTCTTCCAACCCTTTCTCCTTCTCCCTCCAACACCATCTCCCGCACCCTCCAGGTTCCGCTC AACCAACGTCCCAAGCCTCAGCAACAACTTCAGTTTCTGTTCGATGATGTTTCACAGCTTCAGATTCTGGTTCGGAATGTTGTGGCGGGTATCCGAAGCA GGAAGGTTCGGAGTGTTATTGATACTTTGAACAAAGTGTTGAAGGAACAGGAGCAGTTTGGTGGTGGAGGAGGTTCTTTATCTTTGTCTACTCATTTTGA TGCTTCTTCAATGGATATCATTGGGAAGGAATGTGTTTCTATGGTTAAATGTGGTCGAATTCATGAAGCTGTTGAATTCATGGAGGTTCTCTCACGTTTC CAATTATCAGTCAGAAAGCTAGTTCAGCCATCCGACATTATAAAGCAATGTGTTCTTAGTCGTAACCCAAATCTAGCTGTGAGGTATGCTTGTCTTCTCC CACATGCACATATATTGTTCTGCAACATCATATGTGAATTTGGTAAAGGTAGGGATTTAGCATCTGCTCTGAAAGCATATGATGCATCAAAGAAACACTT GAATAGTCCCAACATGTACATATACCGGGCAATAATTGATGCTTGCGGTCTCTGTGGCGATTGTATGAAATCTAGGTACATATATGAGGTATTTTCTTAC CAGTTTACATTCTCTCACTTCCACTTGTTTACAAAGACTTAAATCGAAGGGCCCTTTTAAAGATATCTGAGTTTTATTTTTGTATTCTACAGTCCTAAAA CATAGTTCTTAGCATAAGCTATTTACACTTTACAGTTCCATGTTTATTCACTCACTCCATTGCTTTTGCTCCTTTTCTCTTGAATTAGAAATCATAGATA GATCAAATTTGGAGCCACTGTAGTTAGAGCCACAAAGTATGGCCTAAAGTTTCTAGTTTGAAAGATGTGTGGAGAAACATATCAAACTTCTGTCAGCACA TGCAGATCAAATCAACTTATATTATGTGGATTTAAGTTGGATTCAGTGAGACAGTGACAATGTAAAAAGTTTACACCATCATTGGATTAAACACTTTCTT GTTTAGTATATTGCATAAGAAAGCTTTACGTTGATAACTTTTTTATTTTCTCTTTGCAACCCCTGAATATGCCAGAAAGTATTGGGTAAATAGCCACCTT GGTCCCTGAGAGTGCAATCACCGTTCACTTTAGTCCATGACAGATGAAAATTACCCTTTTAGTCTCCGACAGTATAGTCACCCTTAACTTTAGTCCCTTG CAAATGAAATTTACCTTTTTAGTCTCTGGCAGTGTTTTTGTTCTCAGTCAGTTACATCTTCCTGGAGGGACTTAACCAATTGGCGTCAAACACCGTCTGG GACTTAACTGACTGATGTCAAACCCAACCAGAGACTAAAATGTGTAATTTTCATCTGCCAGCGACTAAAGTGGAGGGTGACTGCCCTACTCTGCCGGGGA CTAAAAAAGTAATTATTATATGCCAGAGAGTAAAGTGAAGAGTGGCTACACTGTCACGAGTCAAAGTGGTATTTACTCAAGAAAAAATAGATATATGTCT GGTGCAGACACTGCACCAAAATGGCATGTCCATGCATTATAAGCTAGGGGTACAGAAACTGTAATTGATGTGCCCTCACATGTTTACTAATATGGTGTTG TCTTAGAATTTTATGATGCTAAGTTTAAACTTGATTAATCAATGAAAGATAAATTCCATACTATTAATAATGATTTTGGCTGACAAGCACTAACTCAGAT GAGTACTATAGCATTCATGTGCACAATTTATGGTGCAGGATTTACTCAATCAGAAGATCACTCCTAATATATATGTGTTCAACAGTCTCATGAATGTGAA TGTCCATGACCTGAGCTACACATTAAAACTACACGAGAATATGCAGAATCTTGGCCTGAAGCCAGATATGACATCTTATAACATCCTGCTGAAAGCATGC TGTGTTGCTGGAAGAGTTGACTTGGCTCAAGACATGTATAGGGAACTTAAACATTTGGAATCAGTTGGACGGCTGAAATTAGATGTTTTTACCTACAGCA CAATTATAAAGGTATTTGCAGATGCAAAAATGTGGCAAACGGCTCTAAAAATTAAGCAGGATATGCTGTCTGCTGGTGTTTCTCTTAATACTGTTGCATG GTCATCACTAATCAATGCTTGCGCACATGCGGGGCTTGTAGAGCAGTCAATCCAGTTATTCGAAGAAATGCTTTTGGCTGGCTGTGAACCTAATACACAA TGTTTCAATATTATTTTACATGCTTGTGTTGAAGCTTGCCAATATGACAGGGCTTTTCGCTTTTTCCATTCTTGGAAGGGAAATAAGATGTTGGAGTCCT CCGGCGAAGGCTACAAAAGCAATTTTGAGCAGGGAGACATGCATAATGCTACTAATTTGCCAACTGGCATTTCTAATTCTCACATCTTGAGTTTTGCTAA GAGGTTCCCTTTCAAACCTACTACAACAACATATAATATTCTACTGAAGGCCTGTGGTACTGATTATTACCATGCAAAAGCAATAATCAACGAGATGAAA ACAATAGGTCTTTCCCCTAATCACATAAGCTGGTCAATTCTGATTGATATATGCGCAGAATCAGAAAATGTCGAGGGTGCTCTCGAGATTTTGAAAACCA TGTCTTATGATGGAATTAGAGCCGATGTTGTCACGTATACAACAGCCATTAAGGTTTGTGTGGAAAGTAAGGATTTTAAGCAAGCAATATCATTATATGA AGAAATGAAGAGATTTGAGATACATCCAAATTTGGTGACATATAACACACTTTTAAAGGCACGCAGTAAATACGGCTCTTTACTTGAGGTGCAGCAATGC CTAGCTATATACCAGGATATGCGGAAAGCAGGGTACAAACCAAATGATTTCTATCTAGAAGGACTAATTGAGGAGTGGTGTGAAGGAGTGATACAAGATA ACACATGGGACGAAGGGGAGTTTTCTTCCAGCAACAAATCTGAAATAGAGAGACCTGAGAGTTTACTTCTTGAAAAAATCGCAGTACACCTGCTAAACAG GGTAGCCGACATCCTAACAATTGATGTTCAAGAGCTCACAAAGGTTGAAGCTCGCTTGGTTATTCTTGCAGTTCTGCGAATGATCAAAGAGAACTATGGT TTAGGACATTCAGTGAAGAATGATGACATCTTGATCATCATTGGAGCTACCAAAGTCAATGAAACTCCAGCTAAACACATATTAGAAGTTGAAGAAGCAA TAGTAAAACTTCTGCAGAATGAATTAGGCCTTGAAGTTCTTGCAGGCAGAACCAGATTTGCACCAAGTGACACAGCAAAGTTAGAGAACAATAAACTTTC AAATCTCAACATAGAGGCAGTACCAAGAGAAAATGCATTACCTACAAGAATGGGGTTTCACAGAAGGAGTCCTGCAGTTCTACATAAGTTGAAGGTCACT AAAAAATCATTGTACCATTGGTTGCATAGAAAAGTAACTGTTGAATATAGTTTTTGATGATTCCTTTGTTTATAAATTATAAGTAATAGGAATTTTGTAC ATATTGTAGAAGGCCATTTTTTTGCACCGGCTTGTTCGATCTGTATTTATGGCATCTAGGTATAACTGCACATGTATCTGTAACCATAGTATGTCATGGA ATAAAATCATCA
• Tissue: pods
• Gene name: LI_gene_153947;
• Additional information: details;

Expression of Ll_transcript_360304

FPKM

• PAB: 0.3
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0.4
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360304

• Blastp: Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 59.27% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 58.76% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G02830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425441.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;